Protein–RNA interactions for Protein: P40215

NDE1, External NADH-ubiquinone oxidoreductase 1, mitochondrial, yeastyeast

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NDE1P40215 YMR294W-AYMR294W-A 360 nt2.95□□□□□ -1.94
NDE1P40215 YOL085W-AYOL085W-A 213 nt2.95□□□□□ -1.94
NDE1P40215 YPR014CYPR014C 330 nt2.95□□□□□ -1.94
NDE1P40215 VID24YBR105C 1089 nt2.95□□□□□ -1.94
NDE1P40215 RAX2YLR084C 3663 nt2.95□□□□□ -1.94
NDE1P40215 DSF2YBR007C 2211 nt2.95□□□□□ -1.94
NDE1P40215 GEA1YJR031C 4227 nt2.95□□□□□ -1.94
NDE1P40215 YOR296WYOR296W 3870 nt2.94□□□□□ -1.94
NDE1P40215 BAS1YKR099W 2436 nt2.94□□□□□ -1.94
NDE1P40215 CAF120YNL278W 3183 nt2.94□□□□□ -1.94
NDE1P40215 RPS26BYER131W 360 nt2.94□□□□□ -1.94
NDE1P40215 YIL175WYIL175W 318 nt2.94□□□□□ -1.94
NDE1P40215 YJL222W-BYJL222W-B 138 nt2.94□□□□□ -1.94
NDE1P40215 SDS22YKL193C 1017 nt2.94□□□□□ -1.94
NDE1P40215 FPR1YNL135C 345 nt2.94□□□□□ -1.94
NDE1P40215 PIS1YPR113W 663 nt2.94□□□□□ -1.94
NDE1P40215 YCT1YLL055W 1596 nt2.94□□□□□ -1.94
NDE1P40215 NPR1YNL183C 2373 nt2.94□□□□□ -1.94
NDE1P40215 CHS2YBR038W 2892 nt2.94□□□□□ -1.94
NDE1P40215 MDM1YML104C 3384 nt2.94□□□□□ -1.94
NDE1P40215 UTP15YMR093W 1542 nt2.93□□□□□ -1.94
NDE1P40215 YRR1YOR162C 2433 nt2.93□□□□□ -1.94
NDE1P40215 RGC1YPR115W 3252 nt2.93□□□□□ -1.94
NDE1P40215 DYN2YDR424C 279 nt2.93□□□□□ -1.94
NDE1P40215 GPI19YDR437W 423 nt2.93□□□□□ -1.94
NDE1P40215 YHR213WYHR213W 597 nt2.93□□□□□ -1.94
NDE1P40215 YAL026C-AYAL026C-A 438 nt2.93□□□□□ -1.94
NDE1P40215 TDA8YAL064C-A 381 nt2.93□□□□□ -1.94
NDE1P40215 APC9YLR102C 798 nt2.93□□□□□ -1.94
NDE1P40215 YAR062WYAR062W 597 nt2.93□□□□□ -1.94
NDE1P40215 NBP1YLR457C 960 nt2.93□□□□□ -1.94
NDE1P40215 YMR316C-AYMR316C-A 312 nt2.93□□□□□ -1.94
NDE1P40215 YPR203WYPR203W 309 nt2.93□□□□□ -1.94
NDE1P40215 PUF4YGL014W 2667 nt2.93□□□□□ -1.94
NDE1P40215 SDC25YLL016W 3147 nt2.92□□□□□ -1.94
NDE1P40215 CEP3YMR168C 1827 nt2.92□□□□□ -1.94
NDE1P40215 YIP1YGR172C 747 nt2.92□□□□□ -1.94
NDE1P40215 YMR173W-AYMR173W-A 1185 nt2.92□□□□□ -1.94
NDE1P40215 ATG3YNR007C 933 nt2.92□□□□□ -1.94
NDE1P40215 ISU1YPL135W 498 nt2.92□□□□□ -1.94
NDE1P40215 PPH3YDR075W 927 nt2.91□□□□□ -1.94
NDE1P40215 tC(GCA)BtC(GCA)B 72 nt2.91□□□□□ -1.94
NDE1P40215 tC(GCA)GtC(GCA)G 72 nt2.91□□□□□ -1.94
NDE1P40215 tC(GCA)P1tC(GCA)P1 72 nt2.91□□□□□ -1.94
NDE1P40215 tC(GCA)P2tC(GCA)P2 72 nt2.91□□□□□ -1.94
NDE1P40215 ADK1YDR226W 669 nt2.91□□□□□ -1.94
NDE1P40215 YIP5YGL161C 933 nt2.91□□□□□ -1.94
NDE1P40215 YHL006W-AYHL006W-A 354 nt2.91□□□□□ -1.94
NDE1P40215 RPL27AYHR010W 411 nt2.91□□□□□ -1.94
NDE1P40215 ESF2YNR054C 951 nt2.91□□□□□ -1.94
NDE1P40215 BUD21YOR078W 645 nt2.91□□□□□ -1.94
NDE1P40215 TPK2YPL203W 1143 nt2.91□□□□□ -1.94
NDE1P40215 SUL1YBR294W 2580 nt2.91□□□□□ -1.94
NDE1P40215 TRZ1YKR079C 2517 nt2.9□□□□□ -1.94
NDE1P40215 UBX3YDL091C 1368 nt2.9□□□□□ -1.94
NDE1P40215 PRE1YER012W 597 nt2.9□□□□□ -1.95
NDE1P40215 PEX18YHR160C 852 nt2.9□□□□□ -1.95
NDE1P40215 YLR012CYLR012C 300 nt2.9□□□□□ -1.95
NDE1P40215 YBL029C-AYBL029C-A 285 nt2.9□□□□□ -1.95
NDE1P40215 RLI1YDR091C 1827 nt2.9□□□□□ -1.95
NDE1P40215 ISW1YBR245C 3390 nt2.9□□□□□ -1.95
NDE1P40215 DAL5YJR152W 1632 nt2.9□□□□□ -1.95
NDE1P40215 TPS2YDR074W 2691 nt2.89□□□□□ -1.95
NDE1P40215 PSK2YOL045W 3306 nt2.89□□□□□ -1.95
NDE1P40215 YFL012WYFL012W 447 nt2.89□□□□□ -1.95
NDE1P40215 RNR2YJL026W 1200 nt2.89□□□□□ -1.95
NDE1P40215 MRPL33YMR286W 261 nt2.89□□□□□ -1.95
NDE1P40215 TOP2YNL088W 4287 nt2.89□□□□□ -1.95
NDE1P40215 GIM3YNL153C 390 nt2.89□□□□□ -1.95
NDE1P40215 YIL166CYIL166C 1629 nt2.89□□□□□ -1.95
NDE1P40215 NAB3YPL190C 2409 nt2.89□□□□□ -1.95
NDE1P40215 YCR099CYCR099C 468 nt2.88□□□□□ -1.95
NDE1P40215 GPM2YDL021W 936 nt2.88□□□□□ -1.95
NDE1P40215 YEA4YEL004W 1029 nt2.88□□□□□ -1.95
NDE1P40215 YGR283CYGR283C 1026 nt2.88□□□□□ -1.95
NDE1P40215 YHL005CYHL005C 393 nt2.88□□□□□ -1.95
NDE1P40215 RNP1YLL046C 750 nt2.88□□□□□ -1.95
NDE1P40215 YNR034W-AYNR034W-A 297 nt2.88□□□□□ -1.95
NDE1P40215 ALG14YBR070C 714 nt2.88□□□□□ -1.95
NDE1P40215 MED8YBR193C 672 nt2.88□□□□□ -1.95
NDE1P40215 UBP16YPL072W 1500 nt2.88□□□□□ -1.95
NDE1P40215 DBP10YDL031W 2988 nt2.88□□□□□ -1.95
NDE1P40215 ROG1YGL144C 2058 nt2.88□□□□□ -1.95
NDE1P40215 SKT5YBL061C 2091 nt2.88□□□□□ -1.95
NDE1P40215 RPN3YER021W 1572 nt2.87□□□□□ -1.95
NDE1P40215 UBP14YBR058C 2346 nt2.87□□□□□ -1.95
NDE1P40215 NFT1YKR103W 3657 nt2.87□□□□□ -1.95
NDE1P40215 RPS17BYDR447C 411 nt2.87□□□□□ -1.95
NDE1P40215 RSM18YER050C 417 nt2.87□□□□□ -1.95
NDE1P40215 YIR020C-BYIR020C-B 735 nt2.87□□□□□ -1.95
NDE1P40215 RPS29AYLR388W 171 nt2.87□□□□□ -1.95
NDE1P40215 RGM1YMR182C 636 nt2.87□□□□□ -1.95
NDE1P40215 TOM1YDR457W 9807 nt2.87□□□□□ -1.95
NDE1P40215 JJJ1YNL227C 1773 nt2.87□□□□□ -1.95
NDE1P40215 15S_rRNA15S_rRNA 1649 nt2.86□□□□□ -1.95
NDE1P40215 SRC1YML034W 2505 nt2.86□□□□□ -1.95
NDE1P40215 PEP12YOR036W 867 nt2.86□□□□□ -1.95
NDE1P40215 HEH2YDR458C 1992 nt2.86□□□□□ -1.95
NDE1P40215 TLC1TLC1 1301 nt2.86□□□□□ -1.95
NDE1P40215 YLR278CYLR278C 4026 nt2.86□□□□□ -1.95
Retrieved 100 of 7,029 protein–RNA pairs in 171.8 ms