Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CTNNA1P35221 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CTNNA1P35221 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.85■■□□□ 1.09
CTNNA1P35221 AC110285.6-201ENST00000617652 491 ntBASIC21.85■■□□□ 1.09
CTNNA1P35221 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CTNNA1P35221 GABARAPL3-202ENST00000624044 1851 ntBASIC21.85■■□□□ 1.09
CTNNA1P35221 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CTNNA1P35221 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.85■■□□□ 1.09
CTNNA1P35221 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CTNNA1P35221 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.85■■□□□ 1.09
CTNNA1P35221 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.85■■□□□ 1.09
CTNNA1P35221 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CTNNA1P35221 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CTNNA1P35221 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
CTNNA1P35221 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.84■■□□□ 1.09
CTNNA1P35221 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CTNNA1P35221 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.84■■□□□ 1.09
CTNNA1P35221 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.84■■□□□ 1.09
CTNNA1P35221 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.84■■□□□ 1.09
CTNNA1P35221 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
CTNNA1P35221 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.84■■□□□ 1.09
CTNNA1P35221 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CTNNA1P35221 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.84■■□□□ 1.09
CTNNA1P35221 AF213884.3-201ENST00000563833 479 ntBASIC21.84■■□□□ 1.09
CTNNA1P35221 AC073314.1-201ENST00000568729 2216 ntBASIC21.84■■□□□ 1.09
CTNNA1P35221 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CTNNA1P35221 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CTNNA1P35221 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.83■■□□□ 1.09
CTNNA1P35221 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CTNNA1P35221 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
CTNNA1P35221 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CTNNA1P35221 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
CTNNA1P35221 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CTNNA1P35221 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
CTNNA1P35221 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CTNNA1P35221 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
CTNNA1P35221 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
CTNNA1P35221 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CTNNA1P35221 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.83■■□□□ 1.09
CTNNA1P35221 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.83■■□□□ 1.09
CTNNA1P35221 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CTNNA1P35221 AC091305.1-201ENST00000479476 895 ntBASIC21.83■■□□□ 1.09
CTNNA1P35221 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.83■■□□□ 1.09
CTNNA1P35221 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.83■■□□□ 1.09
CTNNA1P35221 EEF1DP3-203ENST00000566025 782 ntBASIC21.83■■□□□ 1.09
CTNNA1P35221 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.83■■□□□ 1.09
CTNNA1P35221 AL031432.3-201ENST00000607698 485 ntBASIC21.83■■□□□ 1.09
CTNNA1P35221 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CTNNA1P35221 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.83■■□□□ 1.09
CTNNA1P35221 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
CTNNA1P35221 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.83■■□□□ 1.08
CTNNA1P35221 AC007952.6-201ENST00000573168 2673 ntBASIC21.83■■□□□ 1.08
CTNNA1P35221 AC003957.1-201ENST00000625108 2673 ntBASIC21.83■■□□□ 1.08
CTNNA1P35221 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CTNNA1P35221 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTNNA1P35221 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTNNA1P35221 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CTNNA1P35221 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTNNA1P35221 AC012414.1-201ENST00000556676 535 ntBASIC21.82■■□□□ 1.08
CTNNA1P35221 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CTNNA1P35221 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.82■■□□□ 1.08
CTNNA1P35221 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTNNA1P35221 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
CTNNA1P35221 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTNNA1P35221 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTNNA1P35221 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CTNNA1P35221 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
CTNNA1P35221 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTNNA1P35221 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CTNNA1P35221 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.81■■□□□ 1.08
CTNNA1P35221 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTNNA1P35221 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.81■■□□□ 1.08
CTNNA1P35221 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.81■■□□□ 1.08
CTNNA1P35221 AC053503.5-201ENST00000601508 636 ntBASIC21.81■■□□□ 1.08
CTNNA1P35221 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CTNNA1P35221 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CTNNA1P35221 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.81■■□□□ 1.08
CTNNA1P35221 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CTNNA1P35221 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTNNA1P35221 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.8■■□□□ 1.08
CTNNA1P35221 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTNNA1P35221 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CTNNA1P35221 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTNNA1P35221 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CTNNA1P35221 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
CTNNA1P35221 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.8■■□□□ 1.08
CTNNA1P35221 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTNNA1P35221 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.8■■□□□ 1.08
CTNNA1P35221 AL136967.2-201ENST00000623968 743 ntBASIC21.8■■□□□ 1.08
CTNNA1P35221 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CTNNA1P35221 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.8■■□□□ 1.08
CTNNA1P35221 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTNNA1P35221 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CTNNA1P35221 RNF165-205ENST00000588679 2904 ntBASIC21.79■■□□□ 1.08
CTNNA1P35221 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTNNA1P35221 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.79■■□□□ 1.08
CTNNA1P35221 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CTNNA1P35221 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTNNA1P35221 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTNNA1P35221 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms