Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHRNA3P32297 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CHRNA3P32297 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHRNA3P32297 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.82■■□□□ 1.08
CHRNA3P32297 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
CHRNA3P32297 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.82■■□□□ 1.08
CHRNA3P32297 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.82■■□□□ 1.08
CHRNA3P32297 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHRNA3P32297 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CHRNA3P32297 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.82■■□□□ 1.08
CHRNA3P32297 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHRNA3P32297 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CHRNA3P32297 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CHRNA3P32297 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHRNA3P32297 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHRNA3P32297 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHRNA3P32297 AC009237.3-201ENST00000393279 1427 ntBASIC21.81■■□□□ 1.08
CHRNA3P32297 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHRNA3P32297 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHRNA3P32297 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHRNA3P32297 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHRNA3P32297 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
CHRNA3P32297 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHRNA3P32297 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.81■■□□□ 1.08
CHRNA3P32297 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.81■■□□□ 1.08
CHRNA3P32297 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHRNA3P32297 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHRNA3P32297 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHRNA3P32297 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.81■■□□□ 1.08
CHRNA3P32297 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.81■■□□□ 1.08
CHRNA3P32297 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHRNA3P32297 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
CHRNA3P32297 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHRNA3P32297 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CHRNA3P32297 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHRNA3P32297 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHRNA3P32297 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHRNA3P32297 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHRNA3P32297 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.8■■□□□ 1.08
CHRNA3P32297 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CHRNA3P32297 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.8■■□□□ 1.08
CHRNA3P32297 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHRNA3P32297 AP005212.1-201ENST00000581547 1997 ntBASIC21.8■■□□□ 1.08
CHRNA3P32297 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHRNA3P32297 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.8■■□□□ 1.08
CHRNA3P32297 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.8■■□□□ 1.08
CHRNA3P32297 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHRNA3P32297 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.8■■□□□ 1.08
CHRNA3P32297 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.8■■□□□ 1.08
CHRNA3P32297 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.8■■□□□ 1.08
CHRNA3P32297 IKBKGP1-201ENST00000612193 1073 ntBASIC21.8■■□□□ 1.08
CHRNA3P32297 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.8■■□□□ 1.08
CHRNA3P32297 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHRNA3P32297 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHRNA3P32297 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CHRNA3P32297 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.8■■□□□ 1.08
CHRNA3P32297 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHRNA3P32297 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.79■■□□□ 1.08
CHRNA3P32297 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.79■■□□□ 1.08
CHRNA3P32297 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.79■■□□□ 1.08
CHRNA3P32297 PLK5-205ENST00000642079 1969 ntBASIC21.79■■□□□ 1.08
CHRNA3P32297 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHRNA3P32297 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHRNA3P32297 AC005224.4-201ENST00000583262 1652 ntBASIC21.79■■□□□ 1.08
CHRNA3P32297 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.79■■□□□ 1.08
CHRNA3P32297 AC092667.1-201ENST00000434301 2586 ntBASIC21.79■■□□□ 1.08
CHRNA3P32297 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.79■■□□□ 1.08
CHRNA3P32297 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.79■■□□□ 1.08
CHRNA3P32297 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.79■■□□□ 1.08
CHRNA3P32297 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CHRNA3P32297 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CHRNA3P32297 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.79■■□□□ 1.08
CHRNA3P32297 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHRNA3P32297 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHRNA3P32297 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHRNA3P32297 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CHRNA3P32297 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CHRNA3P32297 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.79■■□□□ 1.08
CHRNA3P32297 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHRNA3P32297 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHRNA3P32297 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHRNA3P32297 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHRNA3P32297 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CHRNA3P32297 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHRNA3P32297 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.78■■□□□ 1.08
CHRNA3P32297 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.78■■□□□ 1.08
CHRNA3P32297 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.78■■□□□ 1.08
CHRNA3P32297 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.78■■□□□ 1.08
CHRNA3P32297 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.78■■□□□ 1.08
CHRNA3P32297 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.78■■□□□ 1.08
CHRNA3P32297 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHRNA3P32297 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
CHRNA3P32297 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHRNA3P32297 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.78■■□□□ 1.08
CHRNA3P32297 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHRNA3P32297 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHRNA3P32297 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.77■■□□□ 1.08
CHRNA3P32297 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHRNA3P32297 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHRNA3P32297 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms