Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SDHAP31040 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
SDHAP31040 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SDHAP31040 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SDHAP31040 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
SDHAP31040 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.56■□□□□ 0.56
SDHAP31040 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.56■□□□□ 0.56
SDHAP31040 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
SDHAP31040 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SDHAP31040 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SDHAP31040 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SDHAP31040 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SDHAP31040 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.56■□□□□ 0.56
SDHAP31040 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SDHAP31040 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.56■□□□□ 0.56
SDHAP31040 AC007225.1-201ENST00000566331 1836 ntBASIC18.56■□□□□ 0.56
SDHAP31040 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
SDHAP31040 AC073314.1-201ENST00000568729 2216 ntBASIC18.55■□□□□ 0.56
SDHAP31040 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SDHAP31040 AC011484.1-201ENST00000377652 1995 ntBASIC18.55■□□□□ 0.56
SDHAP31040 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SDHAP31040 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SDHAP31040 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SDHAP31040 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SDHAP31040 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.55■□□□□ 0.56
SDHAP31040 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
SDHAP31040 AC138907.5-202ENST00000569484 235 ntBASIC18.55■□□□□ 0.56
SDHAP31040 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SDHAP31040 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.55■□□□□ 0.56
SDHAP31040 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SDHAP31040 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SDHAP31040 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SDHAP31040 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SDHAP31040 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SDHAP31040 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SDHAP31040 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SDHAP31040 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.54■□□□□ 0.56
SDHAP31040 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SDHAP31040 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SDHAP31040 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.54■□□□□ 0.56
SDHAP31040 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SDHAP31040 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.54■□□□□ 0.56
SDHAP31040 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SDHAP31040 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.54■□□□□ 0.56
SDHAP31040 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SDHAP31040 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.54■□□□□ 0.56
SDHAP31040 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SDHAP31040 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SDHAP31040 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SDHAP31040 AC092667.1-201ENST00000434301 2586 ntBASIC18.53■□□□□ 0.56
SDHAP31040 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SDHAP31040 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SDHAP31040 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SDHAP31040 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SDHAP31040 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SDHAP31040 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SDHAP31040 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.53■□□□□ 0.56
SDHAP31040 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.53■□□□□ 0.56
SDHAP31040 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
SDHAP31040 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SDHAP31040 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.53■□□□□ 0.56
SDHAP31040 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.53■□□□□ 0.56
SDHAP31040 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
SDHAP31040 LINC02228-203ENST00000641970 1355 ntBASIC18.53■□□□□ 0.56
SDHAP31040 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SDHAP31040 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SDHAP31040 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SDHAP31040 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SDHAP31040 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.52■□□□□ 0.56
SDHAP31040 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SDHAP31040 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SDHAP31040 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SDHAP31040 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.52■□□□□ 0.56
SDHAP31040 KRT16P2-201ENST00000414673 1423 ntBASIC18.52■□□□□ 0.56
SDHAP31040 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.52■□□□□ 0.56
SDHAP31040 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.52■□□□□ 0.56
SDHAP31040 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.52■□□□□ 0.56
SDHAP31040 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SDHAP31040 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SDHAP31040 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SDHAP31040 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SDHAP31040 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SDHAP31040 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SDHAP31040 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SDHAP31040 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
SDHAP31040 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SDHAP31040 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.52■□□□□ 0.55
SDHAP31040 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SDHAP31040 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SDHAP31040 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SDHAP31040 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SDHAP31040 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SDHAP31040 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SDHAP31040 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.51■□□□□ 0.55
SDHAP31040 MIR638-201ENST00000385237 100 ntBASIC18.51■□□□□ 0.55
SDHAP31040 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.51■□□□□ 0.55
SDHAP31040 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.51■□□□□ 0.55
SDHAP31040 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.51■□□□□ 0.55
SDHAP31040 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.51■□□□□ 0.55
SDHAP31040 AC120498.10-201ENST00000621827 505 ntBASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms