Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.69■□□□□ 0.42
APCP25054 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.69■□□□□ 0.42
APCP25054 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.69■□□□□ 0.42
APCP25054 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
APCP25054 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
APCP25054 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
APCP25054 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.68■□□□□ 0.42
APCP25054 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
APCP25054 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC17.68■□□□□ 0.42
APCP25054 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
APCP25054 AC005521.1-201ENST00000393351 872 ntBASIC17.68■□□□□ 0.42
APCP25054 LINC01124-201ENST00000409786 2117 ntBASIC17.68■□□□□ 0.42
APCP25054 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.68■□□□□ 0.42
APCP25054 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.68■□□□□ 0.42
APCP25054 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
APCP25054 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.68■□□□□ 0.42
APCP25054 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
APCP25054 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APCP25054 KRT18P68-201ENST00000392293 1000 ntBASIC17.68■□□□□ 0.42
APCP25054 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.68■□□□□ 0.42
APCP25054 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
APCP25054 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.68■□□□□ 0.42
APCP25054 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
APCP25054 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APCP25054 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC17.68■□□□□ 0.42
APCP25054 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
APCP25054 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
APCP25054 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
APCP25054 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
APCP25054 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
APCP25054 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APCP25054 MMP23A-201ENST00000234610 1017 ntBASIC17.67■□□□□ 0.42
APCP25054 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APCP25054 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.67■□□□□ 0.42
APCP25054 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.67■□□□□ 0.42
APCP25054 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.67■□□□□ 0.42
APCP25054 AC120498.8-201ENST00000614275 531 ntBASIC17.67■□□□□ 0.42
APCP25054 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
APCP25054 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APCP25054 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
APCP25054 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
APCP25054 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
APCP25054 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APCP25054 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APCP25054 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.67■□□□□ 0.42
APCP25054 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
APCP25054 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APCP25054 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
APCP25054 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
APCP25054 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
APCP25054 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
APCP25054 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
APCP25054 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
APCP25054 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
APCP25054 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.67■□□□□ 0.42
APCP25054 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
APCP25054 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC17.66■□□□□ 0.42
APCP25054 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.66■□□□□ 0.42
APCP25054 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
APCP25054 AC142381.3-201ENST00000568208 1670 ntBASIC17.66■□□□□ 0.42
APCP25054 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APCP25054 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
APCP25054 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APCP25054 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
APCP25054 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APCP25054 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APCP25054 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APCP25054 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
APCP25054 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
APCP25054 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.66■□□□□ 0.42
APCP25054 AL121894.2-201ENST00000602977 491 ntBASIC17.66■□□□□ 0.42
APCP25054 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APCP25054 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.65■□□□□ 0.42
APCP25054 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
APCP25054 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
APCP25054 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.65■□□□□ 0.42
APCP25054 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
APCP25054 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.65■□□□□ 0.42
APCP25054 NUDT16P1-203ENST00000513809 620 ntBASIC17.65■□□□□ 0.42
APCP25054 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APCP25054 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APCP25054 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APCP25054 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.65■□□□□ 0.42
APCP25054 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APCP25054 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
APCP25054 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
APCP25054 AC005829.2-201ENST00000571422 1056 ntBASIC17.65■□□□□ 0.42
APCP25054 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
APCP25054 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
APCP25054 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.64■□□□□ 0.41
APCP25054 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
APCP25054 KRASP1-201ENST00000407852 552 ntBASIC17.64■□□□□ 0.41
APCP25054 CRYGFP-201ENST00000418459 633 ntBASIC17.64■□□□□ 0.41
APCP25054 AC091799.1-201ENST00000422823 811 ntBASIC17.64■□□□□ 0.41
APCP25054 RBM17P1-201ENST00000453646 1190 ntBASIC17.64■□□□□ 0.41
APCP25054 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.64■□□□□ 0.41
APCP25054 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.64■□□□□ 0.41
APCP25054 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
APCP25054 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
APCP25054 AC003102.1-202ENST00000563394 1796 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms