Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CHMP24386 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.33■□□□□ 0.68
CHMP24386 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.33■□□□□ 0.68
CHMP24386 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.33■□□□□ 0.68
CHMP24386 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.33■□□□□ 0.68
CHMP24386 AC022517.1-201ENST00000592429 346 ntBASIC19.33■□□□□ 0.68
CHMP24386 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.33■□□□□ 0.68
CHMP24386 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.33■□□□□ 0.68
CHMP24386 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP24386 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CHMP24386 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CHMP24386 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP24386 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.33■□□□□ 0.68
CHMP24386 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP24386 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP24386 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP24386 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP24386 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP24386 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.32■□□□□ 0.68
CHMP24386 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP24386 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP24386 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CHMP24386 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP24386 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP24386 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.32■□□□□ 0.68
CHMP24386 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CHMP24386 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.32■□□□□ 0.68
CHMP24386 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CHMP24386 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.32■□□□□ 0.68
CHMP24386 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.32■□□□□ 0.68
CHMP24386 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.32■□□□□ 0.68
CHMP24386 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.32■□□□□ 0.68
CHMP24386 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.32■□□□□ 0.68
CHMP24386 AP004607.4-201ENST00000530158 1459 ntBASIC19.32■□□□□ 0.68
CHMP24386 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CHMP24386 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP24386 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.32■□□□□ 0.68
CHMP24386 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP24386 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP24386 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP24386 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP24386 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP24386 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.32■□□□□ 0.68
CHMP24386 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP24386 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.31■□□□□ 0.68
CHMP24386 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP24386 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP24386 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP24386 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP24386 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CHMP24386 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP24386 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP24386 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP24386 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP24386 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.31■□□□□ 0.68
CHMP24386 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CHMP24386 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.31■□□□□ 0.68
CHMP24386 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.3■□□□□ 0.68
CHMP24386 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.3■□□□□ 0.68
CHMP24386 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP24386 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
CHMP24386 KRT87P-202ENST00000534226 1464 ntBASIC19.3■□□□□ 0.68
CHMP24386 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP24386 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.3■□□□□ 0.68
CHMP24386 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP24386 AC003102.1-202ENST00000563394 1796 ntBASIC19.3■□□□□ 0.68
CHMP24386 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP24386 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CHMP24386 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CHMP24386 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
CHMP24386 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.3■□□□□ 0.68
CHMP24386 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP24386 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.3■□□□□ 0.68
CHMP24386 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.3■□□□□ 0.68
CHMP24386 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.3■□□□□ 0.68
CHMP24386 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.3■□□□□ 0.68
CHMP24386 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP24386 AL137784.2-201ENST00000607332 1000 ntBASIC19.3■□□□□ 0.68
CHMP24386 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CHMP24386 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP24386 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CHMP24386 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP24386 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.3■□□□□ 0.68
CHMP24386 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP24386 AP006587.3-201ENST00000525742 1516 ntBASIC19.3■□□□□ 0.68
CHMP24386 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.3■□□□□ 0.68
CHMP24386 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CHMP24386 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP24386 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.29■□□□□ 0.68
CHMP24386 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP24386 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP24386 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP24386 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP24386 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP24386 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.29■□□□□ 0.68
CHMP24386 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP24386 KRT19P1-201ENST00000405746 1186 ntBASIC19.29■□□□□ 0.68
CHMP24386 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP24386 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.29■□□□□ 0.68
CHMP24386 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms