Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.29■□□□□ 0.52
MSR1P21757 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.29■□□□□ 0.52
MSR1P21757 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MSR1P21757 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
MSR1P21757 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MSR1P21757 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
MSR1P21757 AC121338.2-201ENST00000622535 1744 ntBASIC18.29■□□□□ 0.52
MSR1P21757 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
MSR1P21757 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MSR1P21757 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
MSR1P21757 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
MSR1P21757 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MSR1P21757 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.28■□□□□ 0.52
MSR1P21757 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MSR1P21757 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MSR1P21757 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MSR1P21757 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
MSR1P21757 MIR6821-201ENST00000617625 74 ntBASIC18.28■□□□□ 0.52
MSR1P21757 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MSR1P21757 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.28■□□□□ 0.52
MSR1P21757 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MSR1P21757 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MSR1P21757 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MSR1P21757 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MSR1P21757 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
MSR1P21757 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MSR1P21757 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MSR1P21757 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MSR1P21757 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
MSR1P21757 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MSR1P21757 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MSR1P21757 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MSR1P21757 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.27■□□□□ 0.52
MSR1P21757 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.27■□□□□ 0.52
MSR1P21757 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.27■□□□□ 0.52
MSR1P21757 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.27■□□□□ 0.52
MSR1P21757 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.27■□□□□ 0.52
MSR1P21757 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MSR1P21757 AC006128.1-201ENST00000624704 1661 ntBASIC18.27■□□□□ 0.52
MSR1P21757 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.27■□□□□ 0.51
MSR1P21757 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
MSR1P21757 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.27■□□□□ 0.51
MSR1P21757 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.27■□□□□ 0.51
MSR1P21757 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
MSR1P21757 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MSR1P21757 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
MSR1P21757 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
MSR1P21757 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.26■□□□□ 0.51
MSR1P21757 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.26■□□□□ 0.51
MSR1P21757 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.26■□□□□ 0.51
MSR1P21757 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MSR1P21757 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
MSR1P21757 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MSR1P21757 SLC7A5P2-201ENST00000553010 536 ntBASIC18.26■□□□□ 0.51
MSR1P21757 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
MSR1P21757 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MSR1P21757 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.26■□□□□ 0.51
MSR1P21757 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MSR1P21757 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MSR1P21757 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MSR1P21757 PLK5-205ENST00000642079 1969 ntBASIC18.26■□□□□ 0.51
MSR1P21757 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.26■□□□□ 0.51
MSR1P21757 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MSR1P21757 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MSR1P21757 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
MSR1P21757 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MSR1P21757 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MSR1P21757 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
MSR1P21757 AC019069.1-201ENST00000610008 1333 ntBASIC18.25■□□□□ 0.51
MSR1P21757 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MSR1P21757 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.25■□□□□ 0.51
MSR1P21757 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MSR1P21757 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
MSR1P21757 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MSR1P21757 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.25■□□□□ 0.51
MSR1P21757 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MSR1P21757 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.25■□□□□ 0.51
MSR1P21757 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.25■□□□□ 0.51
MSR1P21757 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.25■□□□□ 0.51
MSR1P21757 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
MSR1P21757 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MSR1P21757 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.25■□□□□ 0.51
MSR1P21757 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.25■□□□□ 0.51
MSR1P21757 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MSR1P21757 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
MSR1P21757 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
MSR1P21757 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MSR1P21757 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MSR1P21757 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
MSR1P21757 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MSR1P21757 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.25■□□□□ 0.51
MSR1P21757 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MSR1P21757 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MSR1P21757 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
MSR1P21757 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MSR1P21757 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MSR1P21757 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MSR1P21757 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MSR1P21757 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.24■□□□□ 0.51
MSR1P21757 AC087623.3-201ENST00000607047 1098 ntBASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms