Protein–RNA interactions for Protein: P20929

NEB, Nebulin, humanhuman

Predictions only

Length 6,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEBP20929 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
NEBP20929 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC8□□□□□ -1.13
NEBP20929 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC8□□□□□ -1.13
NEBP20929 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC8□□□□□ -1.13
NEBP20929 NUS1P1-201ENST00000446295 882 ntBASIC8□□□□□ -1.13
NEBP20929 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
NEBP20929 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC8□□□□□ -1.13
NEBP20929 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC8□□□□□ -1.13
NEBP20929 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC8□□□□□ -1.13
NEBP20929 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC8□□□□□ -1.13
NEBP20929 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC8□□□□□ -1.13
NEBP20929 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC8□□□□□ -1.13
NEBP20929 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
NEBP20929 AC092647.4-201ENST00000457211 535 ntBASIC8□□□□□ -1.13
NEBP20929 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC8□□□□□ -1.13
NEBP20929 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
NEBP20929 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC8□□□□□ -1.13
NEBP20929 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC8□□□□□ -1.13
NEBP20929 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
NEBP20929 AC007274.1-201ENST00000439805 662 ntBASIC8□□□□□ -1.13
NEBP20929 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
NEBP20929 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC8□□□□□ -1.13
NEBP20929 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC7.99□□□□□ -1.13
NEBP20929 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC7.99□□□□□ -1.13
NEBP20929 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC7.99□□□□□ -1.13
NEBP20929 AC004687.1-201ENST00000579003 1625 ntBASIC7.99□□□□□ -1.13
NEBP20929 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
NEBP20929 PRR31-201ENST00000371629 978 ntTSL 2 BASIC7.99□□□□□ -1.13
NEBP20929 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
NEBP20929 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC7.99□□□□□ -1.13
NEBP20929 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
NEBP20929 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
NEBP20929 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
NEBP20929 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
NEBP20929 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC7.99□□□□□ -1.13
NEBP20929 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC7.99□□□□□ -1.13
NEBP20929 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
NEBP20929 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
NEBP20929 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
NEBP20929 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC7.99□□□□□ -1.13
NEBP20929 GK-202ENST00000378941 458 ntTSL 3 BASIC7.99□□□□□ -1.13
NEBP20929 MRPL3P1-201ENST00000400109 1033 ntBASIC7.99□□□□□ -1.13
NEBP20929 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC7.99□□□□□ -1.13
NEBP20929 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
NEBP20929 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
NEBP20929 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC7.99□□□□□ -1.13
NEBP20929 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC7.99□□□□□ -1.13
NEBP20929 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
NEBP20929 EGLN1P1-201ENST00000531623 762 ntBASIC7.99□□□□□ -1.13
NEBP20929 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC7.99□□□□□ -1.13
NEBP20929 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
NEBP20929 HES2-202ENST00000377836 507 ntTSL 2 BASIC7.98□□□□□ -1.13
NEBP20929 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.13
NEBP20929 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
NEBP20929 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
NEBP20929 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC7.98□□□□□ -1.13
NEBP20929 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC7.98□□□□□ -1.13
NEBP20929 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC7.98□□□□□ -1.13
NEBP20929 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC7.98□□□□□ -1.13
NEBP20929 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
NEBP20929 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC7.98□□□□□ -1.13
NEBP20929 AC079776.4-201ENST00000511039 504 ntBASIC7.98□□□□□ -1.13
NEBP20929 AL662844.1-201ENST00000546340 181 ntBASIC7.98□□□□□ -1.13
NEBP20929 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
NEBP20929 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
NEBP20929 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC7.98□□□□□ -1.13
NEBP20929 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
NEBP20929 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC7.98□□□□□ -1.13
NEBP20929 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC7.98□□□□□ -1.13
NEBP20929 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC7.98□□□□□ -1.13
NEBP20929 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC7.98□□□□□ -1.13
NEBP20929 AL591742.1-201ENST00000604433 565 ntBASIC7.98□□□□□ -1.13
NEBP20929 AC011558.1-201ENST00000623459 338 ntBASIC7.98□□□□□ -1.13
NEBP20929 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC7.98□□□□□ -1.13
NEBP20929 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
NEBP20929 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
NEBP20929 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC7.98□□□□□ -1.13
NEBP20929 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
NEBP20929 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC7.98□□□□□ -1.13
NEBP20929 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
NEBP20929 MIR940-201ENST00000401276 94 ntBASIC7.98□□□□□ -1.13
NEBP20929 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC7.98□□□□□ -1.13
NEBP20929 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC7.98□□□□□ -1.13
NEBP20929 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
NEBP20929 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.13
NEBP20929 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC7.98□□□□□ -1.13
NEBP20929 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
NEBP20929 AL136038.3-201ENST00000561909 1096 ntBASIC7.98□□□□□ -1.13
NEBP20929 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
NEBP20929 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC7.97□□□□□ -1.13
NEBP20929 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC7.97□□□□□ -1.13
NEBP20929 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC7.97□□□□□ -1.13
NEBP20929 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC7.97□□□□□ -1.13
NEBP20929 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC7.97□□□□□ -1.13
NEBP20929 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC7.97□□□□□ -1.13
NEBP20929 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
NEBP20929 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
NEBP20929 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
NEBP20929 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
NEBP20929 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms