Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CAPN2P17655 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CAPN2P17655 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CAPN2P17655 KRT16P2-201ENST00000414673 1423 ntBASIC23.79■■□□□ 1.4
CAPN2P17655 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CAPN2P17655 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CAPN2P17655 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CAPN2P17655 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC23.79■■□□□ 1.4
CAPN2P17655 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC23.79■■□□□ 1.4
CAPN2P17655 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC23.79■■□□□ 1.4
CAPN2P17655 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CAPN2P17655 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC23.79■■□□□ 1.4
CAPN2P17655 CYP2T3P-201ENST00000601990 817 ntBASIC23.79■■□□□ 1.4
CAPN2P17655 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CAPN2P17655 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CAPN2P17655 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC23.79■■□□□ 1.4
CAPN2P17655 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC23.79■■□□□ 1.4
CAPN2P17655 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CAPN2P17655 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CAPN2P17655 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CAPN2P17655 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
CAPN2P17655 AC127496.7-201ENST00000625110 1798 ntBASIC23.78■■□□□ 1.4
CAPN2P17655 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CAPN2P17655 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
CAPN2P17655 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CAPN2P17655 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CAPN2P17655 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC23.78■■□□□ 1.4
CAPN2P17655 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CAPN2P17655 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC23.78■■□□□ 1.4
CAPN2P17655 RN7SL471P-201ENST00000580476 299 ntBASIC23.78■■□□□ 1.4
CAPN2P17655 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC23.78■■□□□ 1.4
CAPN2P17655 AC100791.3-201ENST00000617619 330 ntBASIC23.78■■□□□ 1.4
CAPN2P17655 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC23.78■■□□□ 1.4
CAPN2P17655 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.78■■□□□ 1.4
CAPN2P17655 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CAPN2P17655 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
CAPN2P17655 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
CAPN2P17655 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CAPN2P17655 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.78■■□□□ 1.4
CAPN2P17655 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CAPN2P17655 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
CAPN2P17655 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CAPN2P17655 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CAPN2P17655 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC23.77■■□□□ 1.4
CAPN2P17655 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CAPN2P17655 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC23.77■■□□□ 1.4
CAPN2P17655 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.77■■□□□ 1.4
CAPN2P17655 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC23.77■■□□□ 1.4
CAPN2P17655 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC23.77■■□□□ 1.4
CAPN2P17655 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CAPN2P17655 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.77■■□□□ 1.4
CAPN2P17655 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CAPN2P17655 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
CAPN2P17655 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.77■■□□□ 1.4
CAPN2P17655 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CAPN2P17655 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.77■■□□□ 1.4
CAPN2P17655 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
CAPN2P17655 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.77■■□□□ 1.4
CAPN2P17655 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CAPN2P17655 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.76■■□□□ 1.39
CAPN2P17655 RBM17P2-201ENST00000616397 1405 ntBASIC23.76■■□□□ 1.39
CAPN2P17655 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC23.76■■□□□ 1.39
CAPN2P17655 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CAPN2P17655 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CAPN2P17655 AL137060.1-201ENST00000618151 2648 ntBASIC23.76■■□□□ 1.39
CAPN2P17655 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CAPN2P17655 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CAPN2P17655 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CAPN2P17655 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CAPN2P17655 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CAPN2P17655 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
CAPN2P17655 OR2A1-AS1-201ENST00000462305 773 ntBASIC23.76■■□□□ 1.39
CAPN2P17655 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC23.76■■□□□ 1.39
CAPN2P17655 CD44-222ENST00000526025 1052 ntTSL 2 BASIC23.76■■□□□ 1.39
CAPN2P17655 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC23.76■■□□□ 1.39
CAPN2P17655 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC23.76■■□□□ 1.39
CAPN2P17655 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CAPN2P17655 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CAPN2P17655 AC092667.1-201ENST00000434301 2586 ntBASIC23.76■■□□□ 1.39
CAPN2P17655 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CAPN2P17655 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CAPN2P17655 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
CAPN2P17655 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CAPN2P17655 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC23.75■■□□□ 1.39
CAPN2P17655 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CAPN2P17655 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
CAPN2P17655 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC23.75■■□□□ 1.39
CAPN2P17655 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC23.75■■□□□ 1.39
CAPN2P17655 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CAPN2P17655 KRT17P2-201ENST00000300992 1314 ntBASIC23.75■■□□□ 1.39
CAPN2P17655 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
CAPN2P17655 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CAPN2P17655 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
CAPN2P17655 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CAPN2P17655 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CAPN2P17655 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
CAPN2P17655 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CAPN2P17655 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
CAPN2P17655 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CAPN2P17655 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms