Protein–RNA interactions for Protein: P16403

HIST1H1C, Histone H1.2, humanhuman

Known RBP Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1CP16403 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HIST1H1CP16403 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
HIST1H1CP16403 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HIST1H1CP16403 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
HIST1H1CP16403 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HIST1H1CP16403 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HIST1H1CP16403 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HIST1H1CP16403 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HIST1H1CP16403 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HIST1H1CP16403 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.59■□□□□ 0.57
HIST1H1CP16403 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HIST1H1CP16403 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HIST1H1CP16403 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.59■□□□□ 0.57
HIST1H1CP16403 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.59■□□□□ 0.57
HIST1H1CP16403 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
HIST1H1CP16403 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HIST1H1CP16403 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.59■□□□□ 0.57
HIST1H1CP16403 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
HIST1H1CP16403 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HIST1H1CP16403 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HIST1H1CP16403 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.59■□□□□ 0.57
HIST1H1CP16403 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HIST1H1CP16403 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
HIST1H1CP16403 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
HIST1H1CP16403 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.58■□□□□ 0.57
HIST1H1CP16403 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
HIST1H1CP16403 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
HIST1H1CP16403 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HIST1H1CP16403 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.58■□□□□ 0.56
HIST1H1CP16403 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HIST1H1CP16403 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.58■□□□□ 0.56
HIST1H1CP16403 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.58■□□□□ 0.56
HIST1H1CP16403 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HIST1H1CP16403 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HIST1H1CP16403 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
HIST1H1CP16403 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
HIST1H1CP16403 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.58■□□□□ 0.56
HIST1H1CP16403 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
HIST1H1CP16403 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HIST1H1CP16403 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
HIST1H1CP16403 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
HIST1H1CP16403 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HIST1H1CP16403 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.57■□□□□ 0.56
HIST1H1CP16403 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
HIST1H1CP16403 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIST1H1CP16403 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIST1H1CP16403 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIST1H1CP16403 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIST1H1CP16403 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.57■□□□□ 0.56
HIST1H1CP16403 FP700111.2-201ENST00000619190 1892 ntBASIC18.57■□□□□ 0.56
HIST1H1CP16403 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
HIST1H1CP16403 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIST1H1CP16403 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.57■□□□□ 0.56
HIST1H1CP16403 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.57■□□□□ 0.56
HIST1H1CP16403 AL139246.5-201ENST00000606645 996 ntBASIC18.57■□□□□ 0.56
HIST1H1CP16403 AL358852.1-201ENST00000623174 1268 ntBASIC18.57■□□□□ 0.56
HIST1H1CP16403 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIST1H1CP16403 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
HIST1H1CP16403 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HIST1H1CP16403 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIST1H1CP16403 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
HIST1H1CP16403 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HIST1H1CP16403 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.56■□□□□ 0.56
HIST1H1CP16403 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HIST1H1CP16403 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
HIST1H1CP16403 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HIST1H1CP16403 MIR6084-201ENST00000622012 110 ntBASIC18.56■□□□□ 0.56
HIST1H1CP16403 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
HIST1H1CP16403 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HIST1H1CP16403 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIST1H1CP16403 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIST1H1CP16403 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIST1H1CP16403 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
HIST1H1CP16403 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.56■□□□□ 0.56
HIST1H1CP16403 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
HIST1H1CP16403 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIST1H1CP16403 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
HIST1H1CP16403 AC011484.1-201ENST00000377652 1995 ntBASIC18.55■□□□□ 0.56
HIST1H1CP16403 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIST1H1CP16403 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HIST1H1CP16403 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HIST1H1CP16403 AC020907.5-201ENST00000624372 1936 ntBASIC18.55■□□□□ 0.56
HIST1H1CP16403 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIST1H1CP16403 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HIST1H1CP16403 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.55■□□□□ 0.56
HIST1H1CP16403 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.55■□□□□ 0.56
HIST1H1CP16403 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
HIST1H1CP16403 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HIST1H1CP16403 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIST1H1CP16403 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.55■□□□□ 0.56
HIST1H1CP16403 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HIST1H1CP16403 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.55■□□□□ 0.56
HIST1H1CP16403 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.55■□□□□ 0.56
HIST1H1CP16403 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.54■□□□□ 0.56
HIST1H1CP16403 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST1H1CP16403 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST1H1CP16403 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.54■□□□□ 0.56
HIST1H1CP16403 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST1H1CP16403 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST1H1CP16403 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms