Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.81■□□□□ 0.76
BCKDHAP12694 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.81■□□□□ 0.76
BCKDHAP12694 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.81■□□□□ 0.76
BCKDHAP12694 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
BCKDHAP12694 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
BCKDHAP12694 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
BCKDHAP12694 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
BCKDHAP12694 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
BCKDHAP12694 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
BCKDHAP12694 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
BCKDHAP12694 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
BCKDHAP12694 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
BCKDHAP12694 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BCKDHAP12694 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
BCKDHAP12694 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
BCKDHAP12694 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.8■□□□□ 0.76
BCKDHAP12694 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
BCKDHAP12694 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
BCKDHAP12694 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.8■□□□□ 0.76
BCKDHAP12694 AC079140.4-201ENST00000507448 529 ntBASIC19.8■□□□□ 0.76
BCKDHAP12694 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.8■□□□□ 0.76
BCKDHAP12694 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.8■□□□□ 0.76
BCKDHAP12694 AC011484.1-201ENST00000377652 1995 ntBASIC19.8■□□□□ 0.76
BCKDHAP12694 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
BCKDHAP12694 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BCKDHAP12694 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BCKDHAP12694 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.8■□□□□ 0.76
BCKDHAP12694 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
BCKDHAP12694 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BCKDHAP12694 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
BCKDHAP12694 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.79■□□□□ 0.76
BCKDHAP12694 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BCKDHAP12694 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
BCKDHAP12694 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
BCKDHAP12694 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BCKDHAP12694 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BCKDHAP12694 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BCKDHAP12694 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.79■□□□□ 0.76
BCKDHAP12694 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BCKDHAP12694 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.79■□□□□ 0.76
BCKDHAP12694 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
BCKDHAP12694 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.79■□□□□ 0.76
BCKDHAP12694 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
BCKDHAP12694 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
BCKDHAP12694 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
BCKDHAP12694 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
BCKDHAP12694 KRT87P-202ENST00000534226 1464 ntBASIC19.79■□□□□ 0.76
BCKDHAP12694 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
BCKDHAP12694 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
BCKDHAP12694 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.78■□□□□ 0.76
BCKDHAP12694 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
BCKDHAP12694 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
BCKDHAP12694 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
BCKDHAP12694 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
BCKDHAP12694 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BCKDHAP12694 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.78■□□□□ 0.76
BCKDHAP12694 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.78■□□□□ 0.76
BCKDHAP12694 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BCKDHAP12694 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BCKDHAP12694 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BCKDHAP12694 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
BCKDHAP12694 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
BCKDHAP12694 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
BCKDHAP12694 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
BCKDHAP12694 FP700111.2-201ENST00000619190 1892 ntBASIC19.77■□□□□ 0.76
BCKDHAP12694 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
BCKDHAP12694 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.77■□□□□ 0.76
BCKDHAP12694 IRS3P-201ENST00000223076 1006 ntBASIC19.77■□□□□ 0.76
BCKDHAP12694 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BCKDHAP12694 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BCKDHAP12694 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BCKDHAP12694 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
BCKDHAP12694 POU5F1P4-201ENST00000413175 1085 ntBASIC19.77■□□□□ 0.76
BCKDHAP12694 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
BCKDHAP12694 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.77■□□□□ 0.76
BCKDHAP12694 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
BCKDHAP12694 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
BCKDHAP12694 AC005837.3-201ENST00000612163 286 ntBASIC19.77■□□□□ 0.76
BCKDHAP12694 AC008175.2-201ENST00000612840 297 ntBASIC19.77■□□□□ 0.76
BCKDHAP12694 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
BCKDHAP12694 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BCKDHAP12694 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
BCKDHAP12694 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.77■□□□□ 0.76
BCKDHAP12694 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
BCKDHAP12694 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BCKDHAP12694 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
BCKDHAP12694 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.77■□□□□ 0.76
BCKDHAP12694 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.75
BCKDHAP12694 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
BCKDHAP12694 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.76■□□□□ 0.75
BCKDHAP12694 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.76■□□□□ 0.75
BCKDHAP12694 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
BCKDHAP12694 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
BCKDHAP12694 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.76■□□□□ 0.75
BCKDHAP12694 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.76■□□□□ 0.75
BCKDHAP12694 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.76■□□□□ 0.75
BCKDHAP12694 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BCKDHAP12694 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
BCKDHAP12694 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
BCKDHAP12694 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms