Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
UBL4AP11441 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
UBL4AP11441 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.13■□□□□ 0.65
UBL4AP11441 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.13■□□□□ 0.65
UBL4AP11441 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
UBL4AP11441 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.13■□□□□ 0.65
UBL4AP11441 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
UBL4AP11441 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.13■□□□□ 0.65
UBL4AP11441 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBL4AP11441 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBL4AP11441 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UBL4AP11441 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBL4AP11441 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBL4AP11441 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBL4AP11441 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBL4AP11441 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
UBL4AP11441 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
UBL4AP11441 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
UBL4AP11441 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.13■□□□□ 0.65
UBL4AP11441 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBL4AP11441 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.12■□□□□ 0.65
UBL4AP11441 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBL4AP11441 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.12■□□□□ 0.65
UBL4AP11441 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBL4AP11441 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.12■□□□□ 0.65
UBL4AP11441 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.12■□□□□ 0.65
UBL4AP11441 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBL4AP11441 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
UBL4AP11441 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
UBL4AP11441 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBL4AP11441 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBL4AP11441 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBL4AP11441 KRT19P1-201ENST00000405746 1186 ntBASIC19.12■□□□□ 0.65
UBL4AP11441 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
UBL4AP11441 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBL4AP11441 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBL4AP11441 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBL4AP11441 RARRES2P6-201ENST00000567333 442 ntBASIC19.12■□□□□ 0.65
UBL4AP11441 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
UBL4AP11441 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBL4AP11441 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.12■□□□□ 0.65
UBL4AP11441 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.12■□□□□ 0.65
UBL4AP11441 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.12■□□□□ 0.65
UBL4AP11441 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.12■□□□□ 0.65
UBL4AP11441 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBL4AP11441 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
UBL4AP11441 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
UBL4AP11441 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBL4AP11441 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBL4AP11441 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.11■□□□□ 0.65
UBL4AP11441 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UBL4AP11441 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBL4AP11441 KRT16P2-201ENST00000414673 1423 ntBASIC19.11■□□□□ 0.65
UBL4AP11441 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.11■□□□□ 0.65
UBL4AP11441 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
UBL4AP11441 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBL4AP11441 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.11■□□□□ 0.65
UBL4AP11441 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.11■□□□□ 0.65
UBL4AP11441 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.11■□□□□ 0.65
UBL4AP11441 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.11■□□□□ 0.65
UBL4AP11441 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.11■□□□□ 0.65
UBL4AP11441 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.11■□□□□ 0.65
UBL4AP11441 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UBL4AP11441 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.11■□□□□ 0.65
UBL4AP11441 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBL4AP11441 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBL4AP11441 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UBL4AP11441 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.11■□□□□ 0.65
UBL4AP11441 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBL4AP11441 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBL4AP11441 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBL4AP11441 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
UBL4AP11441 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.1■□□□□ 0.65
UBL4AP11441 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
UBL4AP11441 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBL4AP11441 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBL4AP11441 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.1■□□□□ 0.65
UBL4AP11441 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBL4AP11441 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBL4AP11441 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.1■□□□□ 0.65
UBL4AP11441 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.1■□□□□ 0.65
UBL4AP11441 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBL4AP11441 NTF6G-201ENST00000591094 616 ntBASIC19.1■□□□□ 0.65
UBL4AP11441 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBL4AP11441 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBL4AP11441 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBL4AP11441 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBL4AP11441 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBL4AP11441 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBL4AP11441 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.09■□□□□ 0.65
UBL4AP11441 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBL4AP11441 KRT18P20-201ENST00000548986 1279 ntBASIC19.09■□□□□ 0.65
UBL4AP11441 KRT18P61-201ENST00000585825 1298 ntBASIC19.09■□□□□ 0.65
UBL4AP11441 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBL4AP11441 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBL4AP11441 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBL4AP11441 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBL4AP11441 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.09■□□□□ 0.65
UBL4AP11441 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
UBL4AP11441 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms