Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RETP07949 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RETP07949 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.96■□□□□ 0.95
RETP07949 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.96■□□□□ 0.95
RETP07949 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RETP07949 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RETP07949 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RETP07949 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RETP07949 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RETP07949 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
RETP07949 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RETP07949 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RETP07949 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.95■□□□□ 0.94
RETP07949 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
RETP07949 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.95■□□□□ 0.94
RETP07949 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.95■□□□□ 0.94
RETP07949 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.95■□□□□ 0.94
RETP07949 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.95■□□□□ 0.94
RETP07949 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.95■□□□□ 0.94
RETP07949 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.95■□□□□ 0.94
RETP07949 AC060766.5-201ENST00000590539 871 ntBASIC20.95■□□□□ 0.94
RETP07949 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.95■□□□□ 0.94
RETP07949 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RETP07949 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RETP07949 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.95■□□□□ 0.94
RETP07949 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RETP07949 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.95■□□□□ 0.94
RETP07949 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RETP07949 RBM17P2-201ENST00000616397 1405 ntBASIC20.95■□□□□ 0.94
RETP07949 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RETP07949 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RETP07949 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RETP07949 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RETP07949 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.94■□□□□ 0.94
RETP07949 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RETP07949 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RETP07949 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RETP07949 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.94■□□□□ 0.94
RETP07949 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
RETP07949 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.94■□□□□ 0.94
RETP07949 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
RETP07949 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RETP07949 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RETP07949 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.94■□□□□ 0.94
RETP07949 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.94■□□□□ 0.94
RETP07949 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RETP07949 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
RETP07949 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RETP07949 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RETP07949 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RETP07949 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RETP07949 AC139530.1-201ENST00000575312 1977 ntBASIC20.94■□□□□ 0.94
RETP07949 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RETP07949 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RETP07949 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RETP07949 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.93■□□□□ 0.94
RETP07949 AC007375.3-201ENST00000600936 2314 ntBASIC20.93■□□□□ 0.94
RETP07949 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
RETP07949 KRT17P3-201ENST00000420566 1262 ntBASIC20.93■□□□□ 0.94
RETP07949 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.93■□□□□ 0.94
RETP07949 KRT18P21-201ENST00000515767 1272 ntBASIC20.93■□□□□ 0.94
RETP07949 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.93■□□□□ 0.94
RETP07949 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.93■□□□□ 0.94
RETP07949 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.93■□□□□ 0.94
RETP07949 HLA-B-256ENST00000639848 1089 ntBASIC20.93■□□□□ 0.94
RETP07949 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RETP07949 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RETP07949 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RETP07949 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RETP07949 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RETP07949 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RETP07949 AC092053.2-201ENST00000640557 1818 ntBASIC20.92■□□□□ 0.94
RETP07949 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RETP07949 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.92■□□□□ 0.94
RETP07949 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RETP07949 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RETP07949 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RETP07949 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.92■□□□□ 0.94
RETP07949 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RETP07949 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RETP07949 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RETP07949 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.92■□□□□ 0.94
RETP07949 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.92■□□□□ 0.94
RETP07949 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.92■□□□□ 0.94
RETP07949 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.92■□□□□ 0.94
RETP07949 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.92■□□□□ 0.94
RETP07949 AC243732.1-201ENST00000612648 864 ntBASIC20.92■□□□□ 0.94
RETP07949 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.92■□□□□ 0.94
RETP07949 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RETP07949 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RETP07949 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RETP07949 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RETP07949 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RETP07949 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.92■□□□□ 0.94
RETP07949 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RETP07949 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.92■□□□□ 0.94
RETP07949 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RETP07949 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RETP07949 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RETP07949 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms