Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CTSDP07339 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CTSDP07339 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.2■□□□□ 0.34
CTSDP07339 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.2■□□□□ 0.34
CTSDP07339 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTSDP07339 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.2■□□□□ 0.34
CTSDP07339 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTSDP07339 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTSDP07339 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.2■□□□□ 0.34
CTSDP07339 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CTSDP07339 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CTSDP07339 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTSDP07339 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTSDP07339 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CTSDP07339 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTSDP07339 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTSDP07339 AC099778.1-201ENST00000568593 1911 ntBASIC17.19■□□□□ 0.34
CTSDP07339 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.19■□□□□ 0.34
CTSDP07339 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTSDP07339 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTSDP07339 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
CTSDP07339 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CTSDP07339 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTSDP07339 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTSDP07339 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTSDP07339 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.19■□□□□ 0.34
CTSDP07339 SRD5A1P1-201ENST00000442297 786 ntBASIC17.19■□□□□ 0.34
CTSDP07339 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTSDP07339 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTSDP07339 AL356740.2-201ENST00000601559 647 ntBASIC17.19■□□□□ 0.34
CTSDP07339 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CTSDP07339 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTSDP07339 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTSDP07339 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTSDP07339 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.19■□□□□ 0.34
CTSDP07339 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CTSDP07339 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.19■□□□□ 0.34
CTSDP07339 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTSDP07339 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CTSDP07339 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CTSDP07339 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.18■□□□□ 0.34
CTSDP07339 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTSDP07339 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTSDP07339 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTSDP07339 AC112907.3-201ENST00000577781 2400 ntBASIC17.18■□□□□ 0.34
CTSDP07339 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CTSDP07339 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CTSDP07339 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.18■□□□□ 0.34
CTSDP07339 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.18■□□□□ 0.34
CTSDP07339 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.18■□□□□ 0.34
CTSDP07339 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.18■□□□□ 0.34
CTSDP07339 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CTSDP07339 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.18■□□□□ 0.34
CTSDP07339 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTSDP07339 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.18■□□□□ 0.34
CTSDP07339 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTSDP07339 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTSDP07339 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTSDP07339 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTSDP07339 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CTSDP07339 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTSDP07339 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTSDP07339 KRT16P3-201ENST00000439127 1283 ntBASIC17.17■□□□□ 0.34
CTSDP07339 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.17■□□□□ 0.34
CTSDP07339 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CTSDP07339 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.17■□□□□ 0.34
CTSDP07339 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CTSDP07339 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CTSDP07339 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.16■□□□□ 0.34
CTSDP07339 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTSDP07339 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTSDP07339 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.16■□□□□ 0.34
CTSDP07339 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTSDP07339 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.16■□□□□ 0.34
CTSDP07339 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CTSDP07339 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.16■□□□□ 0.34
CTSDP07339 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
CTSDP07339 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CTSDP07339 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTSDP07339 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTSDP07339 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.16■□□□□ 0.34
CTSDP07339 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.16■□□□□ 0.34
CTSDP07339 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTSDP07339 AL138724.1-201ENST00000606771 1088 ntBASIC17.16■□□□□ 0.34
CTSDP07339 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTSDP07339 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTSDP07339 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTSDP07339 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
CTSDP07339 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.16■□□□□ 0.34
CTSDP07339 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTSDP07339 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.16■□□□□ 0.34
CTSDP07339 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTSDP07339 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTSDP07339 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CTSDP07339 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTSDP07339 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTSDP07339 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTSDP07339 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CTSDP07339 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTSDP07339 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms