Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
COL5A2P05997 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC27.64■■■□□ 2.02
COL5A2P05997 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
COL5A2P05997 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
COL5A2P05997 AC087499.1-201ENST00000418141 1075 ntBASIC27.64■■■□□ 2.01
COL5A2P05997 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
COL5A2P05997 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC27.64■■■□□ 2.01
COL5A2P05997 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC27.64■■■□□ 2.01
COL5A2P05997 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC27.63■■■□□ 2.01
COL5A2P05997 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC27.63■■■□□ 2.01
COL5A2P05997 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC27.63■■■□□ 2.01
COL5A2P05997 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
COL5A2P05997 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
COL5A2P05997 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC27.63■■■□□ 2.01
COL5A2P05997 AC239809.2-201ENST00000415381 517 ntBASIC27.63■■■□□ 2.01
COL5A2P05997 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC27.63■■■□□ 2.01
COL5A2P05997 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
COL5A2P05997 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC27.63■■■□□ 2.01
COL5A2P05997 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
COL5A2P05997 AC012306.2-201ENST00000609350 630 ntBASIC27.63■■■□□ 2.01
COL5A2P05997 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC27.62■■■□□ 2.01
COL5A2P05997 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
COL5A2P05997 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
COL5A2P05997 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC27.62■■■□□ 2.01
COL5A2P05997 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
COL5A2P05997 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC27.62■■■□□ 2.01
COL5A2P05997 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
COL5A2P05997 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC27.62■■■□□ 2.01
COL5A2P05997 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC27.62■■■□□ 2.01
COL5A2P05997 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC27.62■■■□□ 2.01
COL5A2P05997 AC113410.3-201ENST00000623366 203 ntBASIC27.62■■■□□ 2.01
COL5A2P05997 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC27.62■■■□□ 2.01
COL5A2P05997 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
COL5A2P05997 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
COL5A2P05997 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC27.61■■■□□ 2.01
COL5A2P05997 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
COL5A2P05997 NARF-205ENST00000412079 1760 ntTSL 5 BASIC27.61■■■□□ 2.01
COL5A2P05997 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC27.61■■■□□ 2.01
COL5A2P05997 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
COL5A2P05997 TSPY15P-201ENST00000457163 923 ntBASIC27.61■■■□□ 2.01
COL5A2P05997 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC27.61■■■□□ 2.01
COL5A2P05997 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC27.61■■■□□ 2.01
COL5A2P05997 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
COL5A2P05997 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
COL5A2P05997 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC27.61■■■□□ 2.01
COL5A2P05997 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
COL5A2P05997 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
COL5A2P05997 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
COL5A2P05997 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
COL5A2P05997 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
COL5A2P05997 AC010542.4-201ENST00000563151 1910 ntBASIC27.6■■■□□ 2.01
COL5A2P05997 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC27.6■■■□□ 2.01
COL5A2P05997 CBFB-203ENST00000561924 584 ntTSL 5 BASIC27.6■■■□□ 2.01
COL5A2P05997 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC27.6■■■□□ 2.01
COL5A2P05997 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC27.6■■■□□ 2.01
COL5A2P05997 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
COL5A2P05997 AL023875.1-201ENST00000640777 796 ntBASIC27.6■■■□□ 2.01
COL5A2P05997 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC27.6■■■□□ 2.01
COL5A2P05997 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC27.6■■■□□ 2.01
COL5A2P05997 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC27.6■■■□□ 2.01
COL5A2P05997 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
COL5A2P05997 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
COL5A2P05997 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
COL5A2P05997 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
COL5A2P05997 RCN1P1-201ENST00000400413 996 ntBASIC27.59■■■□□ 2.01
COL5A2P05997 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
COL5A2P05997 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC27.59■■■□□ 2.01
COL5A2P05997 TK2-204ENST00000525974 1178 ntTSL 2 BASIC27.59■■■□□ 2.01
COL5A2P05997 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC27.59■■■□□ 2.01
COL5A2P05997 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC27.59■■■□□ 2.01
COL5A2P05997 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC27.59■■■□□ 2.01
COL5A2P05997 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
COL5A2P05997 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC27.59■■■□□ 2.01
COL5A2P05997 PKM-204ENST00000449901 2526 ntTSL 2 BASIC27.59■■■□□ 2.01
COL5A2P05997 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
COL5A2P05997 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC27.59■■■□□ 2.01
COL5A2P05997 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
COL5A2P05997 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
COL5A2P05997 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
COL5A2P05997 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
COL5A2P05997 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC27.58■■■□□ 2.01
COL5A2P05997 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC27.58■■■□□ 2.01
COL5A2P05997 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC27.58■■■□□ 2.01
COL5A2P05997 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
COL5A2P05997 AL355075.4-201ENST00000554988 638 ntBASIC27.58■■■□□ 2.01
COL5A2P05997 MIR4785-201ENST00000585005 73 ntBASIC27.58■■■□□ 2.01
COL5A2P05997 KRT17P2-201ENST00000300992 1314 ntBASIC27.58■■■□□ 2.01
COL5A2P05997 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC27.58■■■□□ 2.01
COL5A2P05997 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
COL5A2P05997 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC27.58■■■□□ 2.01
COL5A2P05997 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
COL5A2P05997 AC087633.2-202ENST00000565166 1439 ntBASIC27.58■■■□□ 2.01
COL5A2P05997 STX5-203ENST00000394690 1568 ntTSL 5 BASIC27.58■■■□□ 2.01
COL5A2P05997 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
COL5A2P05997 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC27.58■■■□□ 2.01
COL5A2P05997 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC27.58■■■□□ 2.01
COL5A2P05997 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC27.57■■■□□ 2
COL5A2P05997 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
COL5A2P05997 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC27.57■■■□□ 2
COL5A2P05997 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms