Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOBP04114 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC13.1□□□□□ -0.31
APOBP04114 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC13.1□□□□□ -0.31
APOBP04114 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC13.1□□□□□ -0.31
APOBP04114 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
APOBP04114 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOBP04114 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC13.1□□□□□ -0.31
APOBP04114 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
APOBP04114 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
APOBP04114 KRT17P2-201ENST00000300992 1314 ntBASIC13.1□□□□□ -0.31
APOBP04114 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APOBP04114 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
APOBP04114 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOBP04114 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APOBP04114 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
APOBP04114 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC13.1□□□□□ -0.31
APOBP04114 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOBP04114 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
APOBP04114 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC13.1□□□□□ -0.31
APOBP04114 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC13.1□□□□□ -0.31
APOBP04114 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOBP04114 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOBP04114 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC13.09□□□□□ -0.31
APOBP04114 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOBP04114 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOBP04114 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC13.09□□□□□ -0.31
APOBP04114 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
APOBP04114 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APOBP04114 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APOBP04114 HES2-206ENST00000489730 730 ntTSL 2 BASIC13.09□□□□□ -0.31
APOBP04114 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOBP04114 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOBP04114 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APOBP04114 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APOBP04114 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOBP04114 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOBP04114 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APOBP04114 CRAT-202ENST00000393384 973 ntTSL 2 BASIC13.09□□□□□ -0.31
APOBP04114 SAPCD2P4-201ENST00000424595 1171 ntBASIC13.09□□□□□ -0.31
APOBP04114 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC13.09□□□□□ -0.31
APOBP04114 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
APOBP04114 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
APOBP04114 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOBP04114 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
APOBP04114 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC13.09□□□□□ -0.31
APOBP04114 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
APOBP04114 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APOBP04114 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
APOBP04114 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC13.09□□□□□ -0.31
APOBP04114 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
APOBP04114 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
APOBP04114 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
APOBP04114 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC13.08□□□□□ -0.31
APOBP04114 Six3os1_6.1-201ENST00000620790 196 ntBASIC13.08□□□□□ -0.31
APOBP04114 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
APOBP04114 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOBP04114 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.32
APOBP04114 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOBP04114 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOBP04114 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOBP04114 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC13.08□□□□□ -0.32
APOBP04114 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APOBP04114 AP003071.4-201ENST00000562276 1284 ntBASIC13.08□□□□□ -0.32
APOBP04114 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOBP04114 AC073508.3-201ENST00000619697 1419 ntBASIC13.08□□□□□ -0.32
APOBP04114 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOBP04114 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APOBP04114 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APOBP04114 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC13.08□□□□□ -0.32
APOBP04114 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC13.08□□□□□ -0.32
APOBP04114 AC026471.5-201ENST00000615068 467 ntBASIC13.08□□□□□ -0.32
APOBP04114 SRI-203ENST00000419179 1307 ntTSL 2 BASIC13.08□□□□□ -0.32
APOBP04114 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APOBP04114 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOBP04114 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC13.08□□□□□ -0.32
APOBP04114 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOBP04114 KRASP1-201ENST00000407852 552 ntBASIC13.08□□□□□ -0.32
APOBP04114 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOBP04114 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOBP04114 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOBP04114 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC13.07□□□□□ -0.32
APOBP04114 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APOBP04114 NXN-202ENST00000537628 1340 ntTSL 3 BASIC13.07□□□□□ -0.32
APOBP04114 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOBP04114 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC13.07□□□□□ -0.32
APOBP04114 BRWD1-AS2-201ENST00000603064 1028 ntBASIC13.07□□□□□ -0.32
APOBP04114 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOBP04114 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOBP04114 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOBP04114 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APOBP04114 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC13.07□□□□□ -0.32
APOBP04114 PRR31-201ENST00000371629 978 ntTSL 2 BASIC13.07□□□□□ -0.32
APOBP04114 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APOBP04114 AC093323.1-202ENST00000635031 2045 ntBASIC13.07□□□□□ -0.32
APOBP04114 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC13.07□□□□□ -0.32
APOBP04114 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC13.07□□□□□ -0.32
APOBP04114 PTPA-214ENST00000423100 988 ntTSL 2 BASIC13.06□□□□□ -0.32
APOBP04114 DUT-205ENST00000558813 769 ntTSL 2 BASIC13.06□□□□□ -0.32
APOBP04114 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
APOBP04114 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms