Protein–RNA interactions for Protein: P01138

NGF, Beta-nerve growth factor, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFP01138 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NGFP01138 AC092437.1-201ENST00000624794 1048 ntBASIC17.97■□□□□ 0.47
NGFP01138 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.97■□□□□ 0.47
NGFP01138 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.97■□□□□ 0.47
NGFP01138 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
NGFP01138 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.97■□□□□ 0.47
NGFP01138 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NGFP01138 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NGFP01138 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NGFP01138 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NGFP01138 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.96■□□□□ 0.47
NGFP01138 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NGFP01138 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.96■□□□□ 0.47
NGFP01138 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NGFP01138 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.96■□□□□ 0.47
NGFP01138 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
NGFP01138 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
NGFP01138 KRT18P11-201ENST00000435214 1283 ntBASIC17.96■□□□□ 0.47
NGFP01138 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.96■□□□□ 0.47
NGFP01138 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.96■□□□□ 0.47
NGFP01138 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
NGFP01138 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NGFP01138 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.96■□□□□ 0.47
NGFP01138 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.96■□□□□ 0.47
NGFP01138 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NGFP01138 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
NGFP01138 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
NGFP01138 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
NGFP01138 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
NGFP01138 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.95■□□□□ 0.46
NGFP01138 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
NGFP01138 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NGFP01138 AC245052.3-201ENST00000450182 901 ntBASIC17.95■□□□□ 0.46
NGFP01138 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
NGFP01138 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.95■□□□□ 0.46
NGFP01138 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NGFP01138 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NGFP01138 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NGFP01138 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NGFP01138 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
NGFP01138 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NGFP01138 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NGFP01138 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.95■□□□□ 0.46
NGFP01138 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.95■□□□□ 0.46
NGFP01138 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NGFP01138 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NGFP01138 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NGFP01138 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NGFP01138 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NGFP01138 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
NGFP01138 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NGFP01138 MFSD11-216ENST00000590393 1141 ntBASIC17.94■□□□□ 0.46
NGFP01138 AC011767.1-201ENST00000617410 1153 ntBASIC17.94■□□□□ 0.46
NGFP01138 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.94■□□□□ 0.46
NGFP01138 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
NGFP01138 RBM17P2-201ENST00000616397 1405 ntBASIC17.94■□□□□ 0.46
NGFP01138 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NGFP01138 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NGFP01138 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NGFP01138 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NGFP01138 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NGFP01138 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NGFP01138 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NGFP01138 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
NGFP01138 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NGFP01138 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NGFP01138 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NGFP01138 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NGFP01138 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.93■□□□□ 0.46
NGFP01138 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NGFP01138 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NGFP01138 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
NGFP01138 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NGFP01138 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NGFP01138 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.93■□□□□ 0.46
NGFP01138 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NGFP01138 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NGFP01138 AC010536.3-201ENST00000620306 533 ntBASIC17.93■□□□□ 0.46
NGFP01138 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.93■□□□□ 0.46
NGFP01138 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
NGFP01138 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.93■□□□□ 0.46
NGFP01138 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NGFP01138 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NGFP01138 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.92■□□□□ 0.46
NGFP01138 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.92■□□□□ 0.46
NGFP01138 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.92■□□□□ 0.46
NGFP01138 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
NGFP01138 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.92■□□□□ 0.46
NGFP01138 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.92■□□□□ 0.46
NGFP01138 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NGFP01138 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.92■□□□□ 0.46
NGFP01138 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NGFP01138 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NGFP01138 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NGFP01138 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.92■□□□□ 0.46
NGFP01138 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
NGFP01138 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
NGFP01138 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
NGFP01138 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NGFP01138 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms