Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.08■□□□□ 0.32
TGFAP01135 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TGFAP01135 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.08■□□□□ 0.32
TGFAP01135 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.08■□□□□ 0.32
TGFAP01135 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.08■□□□□ 0.32
TGFAP01135 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TGFAP01135 AC008403.3-201ENST00000598924 454 ntBASIC17.08■□□□□ 0.32
TGFAP01135 AL359736.2-201ENST00000621992 437 ntBASIC17.08■□□□□ 0.32
TGFAP01135 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TGFAP01135 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TGFAP01135 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TGFAP01135 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.08■□□□□ 0.32
TGFAP01135 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TGFAP01135 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
TGFAP01135 AC026471.6-201ENST00000622954 1905 ntBASIC17.08■□□□□ 0.32
TGFAP01135 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TGFAP01135 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.07■□□□□ 0.32
TGFAP01135 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC17.07■□□□□ 0.32
TGFAP01135 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TGFAP01135 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TGFAP01135 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TGFAP01135 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.07■□□□□ 0.32
TGFAP01135 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TGFAP01135 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.07■□□□□ 0.32
TGFAP01135 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TGFAP01135 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.07■□□□□ 0.32
TGFAP01135 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.07■□□□□ 0.32
TGFAP01135 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TGFAP01135 AC007322.3-201ENST00000426526 701 ntBASIC17.07■□□□□ 0.32
TGFAP01135 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TGFAP01135 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
TGFAP01135 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.07■□□□□ 0.32
TGFAP01135 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.07■□□□□ 0.32
TGFAP01135 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.07■□□□□ 0.32
TGFAP01135 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.07■□□□□ 0.32
TGFAP01135 PNMA6B-201ENST00000538162 1200 ntBASIC17.07■□□□□ 0.32
TGFAP01135 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.07■□□□□ 0.32
TGFAP01135 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.07■□□□□ 0.32
TGFAP01135 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TGFAP01135 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.07■□□□□ 0.32
TGFAP01135 AC010542.4-201ENST00000563151 1910 ntBASIC17.07■□□□□ 0.32
TGFAP01135 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TGFAP01135 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
TGFAP01135 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TGFAP01135 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TGFAP01135 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TGFAP01135 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TGFAP01135 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TGFAP01135 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TGFAP01135 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TGFAP01135 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TGFAP01135 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TGFAP01135 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.06■□□□□ 0.32
TGFAP01135 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TGFAP01135 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.06■□□□□ 0.32
TGFAP01135 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TGFAP01135 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TGFAP01135 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TGFAP01135 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TGFAP01135 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TGFAP01135 C1QBPP2-201ENST00000528754 825 ntBASIC17.06■□□□□ 0.32
TGFAP01135 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.06■□□□□ 0.32
TGFAP01135 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TGFAP01135 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.06■□□□□ 0.32
TGFAP01135 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
TGFAP01135 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TGFAP01135 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TGFAP01135 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.05■□□□□ 0.32
TGFAP01135 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TGFAP01135 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC17.05■□□□□ 0.32
TGFAP01135 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.05■□□□□ 0.32
TGFAP01135 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.05■□□□□ 0.32
TGFAP01135 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TGFAP01135 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TGFAP01135 MIR718-201ENST00000390190 70 ntBASIC17.05■□□□□ 0.32
TGFAP01135 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.05■□□□□ 0.32
TGFAP01135 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TGFAP01135 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.05■□□□□ 0.32
TGFAP01135 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TGFAP01135 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TGFAP01135 AC080038.3-201ENST00000623346 1952 ntBASIC17.05■□□□□ 0.32
TGFAP01135 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TGFAP01135 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TGFAP01135 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TGFAP01135 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
TGFAP01135 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TGFAP01135 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.04■□□□□ 0.32
TGFAP01135 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
TGFAP01135 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.04■□□□□ 0.32
TGFAP01135 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TGFAP01135 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TGFAP01135 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.04■□□□□ 0.32
TGFAP01135 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TGFAP01135 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TGFAP01135 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TGFAP01135 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TGFAP01135 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TGFAP01135 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TGFAP01135 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.04■□□□□ 0.32
TGFAP01135 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms