Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.46■□□□□ 0.55
CDRT1O95170 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDRT1O95170 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
CDRT1O95170 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDRT1O95170 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDRT1O95170 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDRT1O95170 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CDRT1O95170 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CDRT1O95170 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDRT1O95170 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CDRT1O95170 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CDRT1O95170 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDRT1O95170 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDRT1O95170 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
CDRT1O95170 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CDRT1O95170 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDRT1O95170 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDRT1O95170 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.45■□□□□ 0.54
CDRT1O95170 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.45■□□□□ 0.54
CDRT1O95170 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDRT1O95170 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.45■□□□□ 0.54
CDRT1O95170 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDRT1O95170 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDRT1O95170 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.45■□□□□ 0.54
CDRT1O95170 SMG8-203ENST00000578922 2178 ntBASIC18.45■□□□□ 0.54
CDRT1O95170 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CDRT1O95170 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDRT1O95170 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDRT1O95170 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CDRT1O95170 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.44■□□□□ 0.54
CDRT1O95170 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDRT1O95170 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.44■□□□□ 0.54
CDRT1O95170 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDRT1O95170 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CDRT1O95170 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDRT1O95170 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDRT1O95170 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDRT1O95170 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CDRT1O95170 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDRT1O95170 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDRT1O95170 AC099791.2-201ENST00000605725 427 ntBASIC18.44■□□□□ 0.54
CDRT1O95170 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDRT1O95170 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.44■□□□□ 0.54
CDRT1O95170 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CDRT1O95170 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.44■□□□□ 0.54
CDRT1O95170 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDRT1O95170 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.44■□□□□ 0.54
CDRT1O95170 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDRT1O95170 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CDRT1O95170 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDRT1O95170 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.43■□□□□ 0.54
CDRT1O95170 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CDRT1O95170 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.43■□□□□ 0.54
CDRT1O95170 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDRT1O95170 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDRT1O95170 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.43■□□□□ 0.54
CDRT1O95170 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDRT1O95170 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.43■□□□□ 0.54
CDRT1O95170 AC007225.1-201ENST00000566331 1836 ntBASIC18.43■□□□□ 0.54
CDRT1O95170 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDRT1O95170 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDRT1O95170 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CDRT1O95170 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CDRT1O95170 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CDRT1O95170 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.42■□□□□ 0.54
CDRT1O95170 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDRT1O95170 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDRT1O95170 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDRT1O95170 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDRT1O95170 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CDRT1O95170 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDRT1O95170 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDRT1O95170 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.42■□□□□ 0.54
CDRT1O95170 AC121338.2-201ENST00000622535 1744 ntBASIC18.42■□□□□ 0.54
CDRT1O95170 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.42■□□□□ 0.54
CDRT1O95170 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDRT1O95170 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDRT1O95170 AL512408.1-201ENST00000569378 2000 ntBASIC18.42■□□□□ 0.54
CDRT1O95170 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.42■□□□□ 0.54
CDRT1O95170 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDRT1O95170 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CDRT1O95170 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDRT1O95170 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
CDRT1O95170 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDRT1O95170 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDRT1O95170 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.41■□□□□ 0.54
CDRT1O95170 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDRT1O95170 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.41■□□□□ 0.54
CDRT1O95170 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDRT1O95170 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDRT1O95170 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CDRT1O95170 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.41■□□□□ 0.54
CDRT1O95170 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.41■□□□□ 0.54
CDRT1O95170 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDRT1O95170 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDRT1O95170 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDRT1O95170 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
CDRT1O95170 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDRT1O95170 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDRT1O95170 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms