Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC27.78■■■□□ 2.04
LTN1O94822 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
LTN1O94822 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
LTN1O94822 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC27.78■■■□□ 2.04
LTN1O94822 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
LTN1O94822 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC27.77■■■□□ 2.04
LTN1O94822 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
LTN1O94822 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
LTN1O94822 KRT18P68-201ENST00000392293 1000 ntBASIC27.77■■■□□ 2.04
LTN1O94822 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
LTN1O94822 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC27.76■■■□□ 2.04
LTN1O94822 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
LTN1O94822 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
LTN1O94822 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC27.76■■■□□ 2.03
LTN1O94822 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
LTN1O94822 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC27.76■■■□□ 2.03
LTN1O94822 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
LTN1O94822 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
LTN1O94822 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
LTN1O94822 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC27.76■■■□□ 2.03
LTN1O94822 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC27.76■■■□□ 2.03
LTN1O94822 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC27.76■■■□□ 2.03
LTN1O94822 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
LTN1O94822 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
LTN1O94822 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC27.75■■■□□ 2.03
LTN1O94822 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
LTN1O94822 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
LTN1O94822 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC27.75■■■□□ 2.03
LTN1O94822 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
LTN1O94822 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
LTN1O94822 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC27.75■■■□□ 2.03
LTN1O94822 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
LTN1O94822 AL356652.1-201ENST00000615962 565 ntBASIC27.75■■■□□ 2.03
LTN1O94822 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC27.75■■■□□ 2.03
LTN1O94822 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
LTN1O94822 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC27.75■■■□□ 2.03
LTN1O94822 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC27.75■■■□□ 2.03
LTN1O94822 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
LTN1O94822 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
LTN1O94822 MDFI-202ENST00000373050 809 ntTSL 2 BASIC27.74■■■□□ 2.03
LTN1O94822 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC27.74■■■□□ 2.03
LTN1O94822 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
LTN1O94822 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC27.74■■■□□ 2.03
LTN1O94822 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC27.74■■■□□ 2.03
LTN1O94822 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC27.74■■■□□ 2.03
LTN1O94822 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC27.74■■■□□ 2.03
LTN1O94822 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
LTN1O94822 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
LTN1O94822 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
LTN1O94822 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
LTN1O94822 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
LTN1O94822 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
LTN1O94822 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
LTN1O94822 REXO2-208ENST00000539754 791 ntTSL 2 BASIC27.73■■■□□ 2.03
LTN1O94822 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC27.73■■■□□ 2.03
LTN1O94822 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
LTN1O94822 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC27.73■■■□□ 2.03
LTN1O94822 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
LTN1O94822 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC27.73■■■□□ 2.03
LTN1O94822 CRK-204ENST00000574295 1391 ntTSL 5 BASIC27.73■■■□□ 2.03
LTN1O94822 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
LTN1O94822 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
LTN1O94822 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC27.73■■■□□ 2.03
LTN1O94822 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC27.73■■■□□ 2.03
LTN1O94822 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
LTN1O94822 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
LTN1O94822 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC27.73■■■□□ 2.03
LTN1O94822 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC27.73■■■□□ 2.03
LTN1O94822 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC27.73■■■□□ 2.03
LTN1O94822 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
LTN1O94822 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC27.72■■■□□ 2.03
LTN1O94822 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
LTN1O94822 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
LTN1O94822 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
LTN1O94822 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
LTN1O94822 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
LTN1O94822 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
LTN1O94822 AC012618.2-201ENST00000428058 849 ntBASIC27.72■■■□□ 2.03
LTN1O94822 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC27.72■■■□□ 2.03
LTN1O94822 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC27.72■■■□□ 2.03
LTN1O94822 CASK-201ENST00000378154 2494 ntTSL 5 BASIC27.72■■■□□ 2.03
LTN1O94822 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC27.72■■■□□ 2.03
LTN1O94822 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
LTN1O94822 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC27.71■■■□□ 2.03
LTN1O94822 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
LTN1O94822 MIR4497-201ENST00000583208 89 ntBASIC27.71■■■□□ 2.03
LTN1O94822 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC27.71■■■□□ 2.03
LTN1O94822 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC27.71■■■□□ 2.03
LTN1O94822 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC27.71■■■□□ 2.03
LTN1O94822 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
LTN1O94822 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
LTN1O94822 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
LTN1O94822 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC27.71■■■□□ 2.03
LTN1O94822 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
LTN1O94822 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
LTN1O94822 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
LTN1O94822 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
LTN1O94822 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
LTN1O94822 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC27.71■■■□□ 2.03
LTN1O94822 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC27.71■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms