Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 NTF6G-201ENST00000591094 616 ntBASIC21.61■■□□□ 1.05
LRCH4O75427 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
LRCH4O75427 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.61■■□□□ 1.05
LRCH4O75427 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LRCH4O75427 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
LRCH4O75427 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
LRCH4O75427 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
LRCH4O75427 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.61■■□□□ 1.05
LRCH4O75427 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRCH4O75427 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
LRCH4O75427 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.6■■□□□ 1.05
LRCH4O75427 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
LRCH4O75427 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRCH4O75427 FEM1AP1-201ENST00000431297 1995 ntBASIC21.6■■□□□ 1.05
LRCH4O75427 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRCH4O75427 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
LRCH4O75427 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LRCH4O75427 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.6■■□□□ 1.05
LRCH4O75427 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRCH4O75427 AC026271.2-201ENST00000428091 497 ntBASIC21.6■■□□□ 1.05
LRCH4O75427 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.6■■□□□ 1.05
LRCH4O75427 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.6■■□□□ 1.05
LRCH4O75427 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.6■■□□□ 1.05
LRCH4O75427 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.6■■□□□ 1.05
LRCH4O75427 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LRCH4O75427 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRCH4O75427 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRCH4O75427 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRCH4O75427 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
LRCH4O75427 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.6■■□□□ 1.05
LRCH4O75427 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRCH4O75427 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LRCH4O75427 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRCH4O75427 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LRCH4O75427 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.59■■□□□ 1.05
LRCH4O75427 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LRCH4O75427 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
LRCH4O75427 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
LRCH4O75427 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.59■■□□□ 1.05
LRCH4O75427 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.59■■□□□ 1.05
LRCH4O75427 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.59■■□□□ 1.05
LRCH4O75427 SLC7A5P1-201ENST00000568957 537 ntBASIC21.59■■□□□ 1.05
LRCH4O75427 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
LRCH4O75427 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
LRCH4O75427 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.59■■□□□ 1.05
LRCH4O75427 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.59■■□□□ 1.05
LRCH4O75427 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
LRCH4O75427 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.59■■□□□ 1.05
LRCH4O75427 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
LRCH4O75427 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LRCH4O75427 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
LRCH4O75427 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.58■■□□□ 1.05
LRCH4O75427 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
LRCH4O75427 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
LRCH4O75427 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
LRCH4O75427 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LRCH4O75427 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.58■■□□□ 1.05
LRCH4O75427 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.58■■□□□ 1.05
LRCH4O75427 UBE2DNL-204ENST00000602536 740 ntBASIC21.58■■□□□ 1.05
LRCH4O75427 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.58■■□□□ 1.05
LRCH4O75427 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.58■■□□□ 1.05
LRCH4O75427 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.58■■□□□ 1.05
LRCH4O75427 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
LRCH4O75427 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
LRCH4O75427 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
LRCH4O75427 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
LRCH4O75427 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.57■■□□□ 1.04
LRCH4O75427 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
LRCH4O75427 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.57■■□□□ 1.04
LRCH4O75427 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.57■■□□□ 1.04
LRCH4O75427 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRCH4O75427 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRCH4O75427 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.57■■□□□ 1.04
LRCH4O75427 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.57■■□□□ 1.04
LRCH4O75427 RARRES2P6-201ENST00000567333 442 ntBASIC21.57■■□□□ 1.04
LRCH4O75427 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
LRCH4O75427 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LRCH4O75427 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRCH4O75427 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRCH4O75427 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRCH4O75427 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LRCH4O75427 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRCH4O75427 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRCH4O75427 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
LRCH4O75427 RBM17P2-201ENST00000616397 1405 ntBASIC21.56■■□□□ 1.04
LRCH4O75427 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
LRCH4O75427 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.56■■□□□ 1.04
LRCH4O75427 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRCH4O75427 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.56■■□□□ 1.04
LRCH4O75427 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.56■■□□□ 1.04
LRCH4O75427 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.56■■□□□ 1.04
LRCH4O75427 AC007225.1-201ENST00000566331 1836 ntBASIC21.56■■□□□ 1.04
LRCH4O75427 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LRCH4O75427 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRCH4O75427 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRCH4O75427 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.56■■□□□ 1.04
LRCH4O75427 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LRCH4O75427 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRCH4O75427 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRCH4O75427 LINC01006-201ENST00000333319 2292 ntBASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms