Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.02■□□□□ 0.8
CNOT3O75175 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNOT3O75175 AC080038.3-201ENST00000623346 1952 ntBASIC20.02■□□□□ 0.8
CNOT3O75175 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CNOT3O75175 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.02■□□□□ 0.8
CNOT3O75175 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CNOT3O75175 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CNOT3O75175 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CNOT3O75175 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CNOT3O75175 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
CNOT3O75175 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CNOT3O75175 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
CNOT3O75175 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
CNOT3O75175 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CNOT3O75175 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CNOT3O75175 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CNOT3O75175 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.01■□□□□ 0.79
CNOT3O75175 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CNOT3O75175 MIR663A-201ENST00000385250 93 ntBASIC20.01■□□□□ 0.79
CNOT3O75175 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNOT3O75175 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CNOT3O75175 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.01■□□□□ 0.79
CNOT3O75175 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.01■□□□□ 0.79
CNOT3O75175 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CNOT3O75175 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.01■□□□□ 0.79
CNOT3O75175 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.01■□□□□ 0.79
CNOT3O75175 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.01■□□□□ 0.79
CNOT3O75175 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNOT3O75175 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNOT3O75175 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNOT3O75175 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNOT3O75175 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20■□□□□ 0.79
CNOT3O75175 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20■□□□□ 0.79
CNOT3O75175 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CNOT3O75175 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CNOT3O75175 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20■□□□□ 0.79
CNOT3O75175 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20■□□□□ 0.79
CNOT3O75175 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
CNOT3O75175 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20■□□□□ 0.79
CNOT3O75175 AL050303.2-201ENST00000619798 666 ntBASIC20■□□□□ 0.79
CNOT3O75175 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
CNOT3O75175 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CNOT3O75175 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CNOT3O75175 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CNOT3O75175 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20■□□□□ 0.79
CNOT3O75175 AC026310.3-201ENST00000625186 2373 ntBASIC20■□□□□ 0.79
CNOT3O75175 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CNOT3O75175 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20■□□□□ 0.79
CNOT3O75175 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20■□□□□ 0.79
CNOT3O75175 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CNOT3O75175 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CNOT3O75175 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20■□□□□ 0.79
CNOT3O75175 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CNOT3O75175 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CNOT3O75175 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20■□□□□ 0.79
CNOT3O75175 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNOT3O75175 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CNOT3O75175 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.99■□□□□ 0.79
CNOT3O75175 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.99■□□□□ 0.79
CNOT3O75175 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.99■□□□□ 0.79
CNOT3O75175 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNOT3O75175 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.99■□□□□ 0.79
CNOT3O75175 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CNOT3O75175 AC006970.2-201ENST00000450065 779 ntBASIC19.99■□□□□ 0.79
CNOT3O75175 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.99■□□□□ 0.79
CNOT3O75175 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CNOT3O75175 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.99■□□□□ 0.79
CNOT3O75175 AC053503.5-201ENST00000601508 636 ntBASIC19.99■□□□□ 0.79
CNOT3O75175 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNOT3O75175 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.99■□□□□ 0.79
CNOT3O75175 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CNOT3O75175 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNOT3O75175 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CNOT3O75175 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNOT3O75175 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNOT3O75175 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.98■□□□□ 0.79
CNOT3O75175 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNOT3O75175 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CNOT3O75175 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CNOT3O75175 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.98■□□□□ 0.79
CNOT3O75175 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.98■□□□□ 0.79
CNOT3O75175 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.98■□□□□ 0.79
CNOT3O75175 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNOT3O75175 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNOT3O75175 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.98■□□□□ 0.79
CNOT3O75175 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNOT3O75175 NCF1B-203ENST00000435988 1254 ntBASIC19.98■□□□□ 0.79
CNOT3O75175 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CNOT3O75175 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNOT3O75175 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.98■□□□□ 0.79
CNOT3O75175 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CNOT3O75175 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.98■□□□□ 0.79
CNOT3O75175 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNOT3O75175 AC104771.1-201ENST00000603335 964 ntBASIC19.98■□□□□ 0.79
CNOT3O75175 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.98■□□□□ 0.79
CNOT3O75175 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.98■□□□□ 0.79
CNOT3O75175 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNOT3O75175 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNOT3O75175 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.97■□□□□ 0.79
CNOT3O75175 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms