Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
SYNCRIPO60506 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SYNCRIPO60506 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SYNCRIPO60506 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SYNCRIPO60506 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SYNCRIPO60506 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SYNCRIPO60506 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.19■□□□□ 0.98
SYNCRIPO60506 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.19■□□□□ 0.98
SYNCRIPO60506 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.19■□□□□ 0.98
SYNCRIPO60506 RARRES2P4-201ENST00000514074 484 ntBASIC21.19■□□□□ 0.98
SYNCRIPO60506 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.19■□□□□ 0.98
SYNCRIPO60506 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SYNCRIPO60506 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SYNCRIPO60506 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SYNCRIPO60506 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SYNCRIPO60506 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.19■□□□□ 0.98
SYNCRIPO60506 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SYNCRIPO60506 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SYNCRIPO60506 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
SYNCRIPO60506 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
SYNCRIPO60506 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SYNCRIPO60506 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SYNCRIPO60506 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.18■□□□□ 0.98
SYNCRIPO60506 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
SYNCRIPO60506 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SYNCRIPO60506 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SYNCRIPO60506 AC245052.3-201ENST00000450182 901 ntBASIC21.18■□□□□ 0.98
SYNCRIPO60506 RNA5SP413-201ENST00000516373 109 ntBASIC21.18■□□□□ 0.98
SYNCRIPO60506 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.18■□□□□ 0.98
SYNCRIPO60506 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.18■□□□□ 0.98
SYNCRIPO60506 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.18■□□□□ 0.98
SYNCRIPO60506 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SYNCRIPO60506 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SYNCRIPO60506 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SYNCRIPO60506 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SYNCRIPO60506 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SYNCRIPO60506 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.18■□□□□ 0.98
SYNCRIPO60506 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.18■□□□□ 0.98
SYNCRIPO60506 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SYNCRIPO60506 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SYNCRIPO60506 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SYNCRIPO60506 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SYNCRIPO60506 AC007375.3-201ENST00000600936 2314 ntBASIC21.17■□□□□ 0.98
SYNCRIPO60506 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SYNCRIPO60506 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.17■□□□□ 0.98
SYNCRIPO60506 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.17■□□□□ 0.98
SYNCRIPO60506 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.17■□□□□ 0.98
SYNCRIPO60506 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.17■□□□□ 0.98
SYNCRIPO60506 MIR4651-201ENST00000582622 73 ntBASIC21.17■□□□□ 0.98
SYNCRIPO60506 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
SYNCRIPO60506 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.17■□□□□ 0.98
SYNCRIPO60506 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
SYNCRIPO60506 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.17■□□□□ 0.98
SYNCRIPO60506 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.17■□□□□ 0.98
SYNCRIPO60506 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SYNCRIPO60506 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
SYNCRIPO60506 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SYNCRIPO60506 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SYNCRIPO60506 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SYNCRIPO60506 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SYNCRIPO60506 AC010980.2-201ENST00000587099 1412 ntBASIC21.16■□□□□ 0.98
SYNCRIPO60506 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SYNCRIPO60506 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SYNCRIPO60506 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SYNCRIPO60506 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SYNCRIPO60506 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SYNCRIPO60506 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.16■□□□□ 0.98
SYNCRIPO60506 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.16■□□□□ 0.98
SYNCRIPO60506 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.16■□□□□ 0.98
SYNCRIPO60506 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SYNCRIPO60506 AC026471.6-201ENST00000622954 1905 ntBASIC21.16■□□□□ 0.98
SYNCRIPO60506 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SYNCRIPO60506 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SYNCRIPO60506 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SYNCRIPO60506 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SYNCRIPO60506 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SYNCRIPO60506 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.15■□□□□ 0.98
SYNCRIPO60506 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SYNCRIPO60506 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SYNCRIPO60506 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.15■□□□□ 0.98
SYNCRIPO60506 AC097658.1-201ENST00000475555 843 ntBASIC21.15■□□□□ 0.98
SYNCRIPO60506 AC010542.4-201ENST00000563151 1910 ntBASIC21.15■□□□□ 0.98
SYNCRIPO60506 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SYNCRIPO60506 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SYNCRIPO60506 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SYNCRIPO60506 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SYNCRIPO60506 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SYNCRIPO60506 FAM99A-202ENST00000538190 1989 ntBASIC21.14■□□□□ 0.98
SYNCRIPO60506 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.14■□□□□ 0.98
SYNCRIPO60506 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.14■□□□□ 0.97
SYNCRIPO60506 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.14■□□□□ 0.97
SYNCRIPO60506 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SYNCRIPO60506 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SYNCRIPO60506 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.14■□□□□ 0.97
SYNCRIPO60506 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.14■□□□□ 0.97
SYNCRIPO60506 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SYNCRIPO60506 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SYNCRIPO60506 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SYNCRIPO60506 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SYNCRIPO60506 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms