Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSSCA1O60232 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSSCA1O60232 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.88■□□□□ 0.29
SSSCA1O60232 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSSCA1O60232 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.88■□□□□ 0.29
SSSCA1O60232 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SSSCA1O60232 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SSSCA1O60232 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SSSCA1O60232 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
SSSCA1O60232 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SSSCA1O60232 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSSCA1O60232 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSSCA1O60232 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSSCA1O60232 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSSCA1O60232 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSSCA1O60232 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSSCA1O60232 AP006587.3-201ENST00000525742 1516 ntBASIC16.87■□□□□ 0.29
SSSCA1O60232 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC16.87■□□□□ 0.29
SSSCA1O60232 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSSCA1O60232 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC16.87■□□□□ 0.29
SSSCA1O60232 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SSSCA1O60232 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SSSCA1O60232 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SSSCA1O60232 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.87■□□□□ 0.29
SSSCA1O60232 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.87■□□□□ 0.29
SSSCA1O60232 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.87■□□□□ 0.29
SSSCA1O60232 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSSCA1O60232 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SSSCA1O60232 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.87■□□□□ 0.29
SSSCA1O60232 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
SSSCA1O60232 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSSCA1O60232 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SSSCA1O60232 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSSCA1O60232 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SSSCA1O60232 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.86■□□□□ 0.29
SSSCA1O60232 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.86■□□□□ 0.29
SSSCA1O60232 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSSCA1O60232 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SSSCA1O60232 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SSSCA1O60232 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.86■□□□□ 0.29
SSSCA1O60232 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.86■□□□□ 0.29
SSSCA1O60232 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
SSSCA1O60232 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSSCA1O60232 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
SSSCA1O60232 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SSSCA1O60232 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC16.86■□□□□ 0.29
SSSCA1O60232 AC099791.2-201ENST00000605725 427 ntBASIC16.86■□□□□ 0.29
SSSCA1O60232 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC16.86■□□□□ 0.29
SSSCA1O60232 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSSCA1O60232 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SSSCA1O60232 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SSSCA1O60232 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.86■□□□□ 0.29
SSSCA1O60232 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSSCA1O60232 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSSCA1O60232 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.86■□□□□ 0.29
SSSCA1O60232 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSSCA1O60232 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSSCA1O60232 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSSCA1O60232 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.85■□□□□ 0.29
SSSCA1O60232 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSSCA1O60232 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSSCA1O60232 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SSSCA1O60232 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
SSSCA1O60232 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSSCA1O60232 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSSCA1O60232 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSSCA1O60232 AL512408.1-201ENST00000569378 2000 ntBASIC16.85■□□□□ 0.29
SSSCA1O60232 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSSCA1O60232 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSSCA1O60232 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSSCA1O60232 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SSSCA1O60232 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.85■□□□□ 0.29
SSSCA1O60232 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.85■□□□□ 0.29
SSSCA1O60232 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.84■□□□□ 0.29
SSSCA1O60232 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSSCA1O60232 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSSCA1O60232 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.84■□□□□ 0.29
SSSCA1O60232 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSSCA1O60232 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SSSCA1O60232 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SSSCA1O60232 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSSCA1O60232 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.84■□□□□ 0.29
SSSCA1O60232 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SSSCA1O60232 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSSCA1O60232 MIR3181-201ENST00000578512 73 ntBASIC16.84■□□□□ 0.29
SSSCA1O60232 AC010525.1-201ENST00000585559 441 ntBASIC16.84■□□□□ 0.29
SSSCA1O60232 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSSCA1O60232 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSSCA1O60232 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SSSCA1O60232 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSSCA1O60232 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSSCA1O60232 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
SSSCA1O60232 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SSSCA1O60232 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSSCA1O60232 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSSCA1O60232 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSSCA1O60232 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSSCA1O60232 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.84■□□□□ 0.29
SSSCA1O60232 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSSCA1O60232 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms