Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DUX1O43812 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DUX1O43812 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DUX1O43812 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DUX1O43812 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
DUX1O43812 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.93■□□□□ 0.78
DUX1O43812 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
DUX1O43812 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DUX1O43812 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DUX1O43812 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DUX1O43812 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DUX1O43812 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DUX1O43812 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
DUX1O43812 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.93■□□□□ 0.78
DUX1O43812 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DUX1O43812 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DUX1O43812 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DUX1O43812 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
DUX1O43812 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
DUX1O43812 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.92■□□□□ 0.78
DUX1O43812 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.92■□□□□ 0.78
DUX1O43812 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
DUX1O43812 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DUX1O43812 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
DUX1O43812 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.92■□□□□ 0.78
DUX1O43812 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DUX1O43812 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.92■□□□□ 0.78
DUX1O43812 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
DUX1O43812 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.92■□□□□ 0.78
DUX1O43812 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DUX1O43812 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.92■□□□□ 0.78
DUX1O43812 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DUX1O43812 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.92■□□□□ 0.78
DUX1O43812 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
DUX1O43812 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DUX1O43812 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DUX1O43812 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
DUX1O43812 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
DUX1O43812 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DUX1O43812 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DUX1O43812 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DUX1O43812 KRT18P68-201ENST00000392293 1000 ntBASIC19.91■□□□□ 0.78
DUX1O43812 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DUX1O43812 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.91■□□□□ 0.78
DUX1O43812 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
DUX1O43812 AC093827.2-201ENST00000512654 315 ntBASIC19.91■□□□□ 0.78
DUX1O43812 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.91■□□□□ 0.78
DUX1O43812 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.91■□□□□ 0.78
DUX1O43812 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
DUX1O43812 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DUX1O43812 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
DUX1O43812 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DUX1O43812 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
DUX1O43812 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
DUX1O43812 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
DUX1O43812 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DUX1O43812 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
DUX1O43812 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
DUX1O43812 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
DUX1O43812 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DUX1O43812 ESRRAP1-201ENST00000400596 1257 ntBASIC19.9■□□□□ 0.78
DUX1O43812 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.9■□□□□ 0.78
DUX1O43812 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.9■□□□□ 0.78
DUX1O43812 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.9■□□□□ 0.78
DUX1O43812 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DUX1O43812 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DUX1O43812 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
DUX1O43812 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DUX1O43812 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
DUX1O43812 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DUX1O43812 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
DUX1O43812 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DUX1O43812 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
DUX1O43812 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DUX1O43812 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
DUX1O43812 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DUX1O43812 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DUX1O43812 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.89■□□□□ 0.77
DUX1O43812 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DUX1O43812 CYP21A1P-202ENST00000354927 1481 ntBASIC19.89■□□□□ 0.77
DUX1O43812 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DUX1O43812 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DUX1O43812 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DUX1O43812 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.89■□□□□ 0.77
DUX1O43812 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DUX1O43812 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.89■□□□□ 0.77
DUX1O43812 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DUX1O43812 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DUX1O43812 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
DUX1O43812 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DUX1O43812 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.89■□□□□ 0.77
DUX1O43812 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.89■□□□□ 0.77
DUX1O43812 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.89■□□□□ 0.77
DUX1O43812 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DUX1O43812 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DUX1O43812 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DUX1O43812 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DUX1O43812 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DUX1O43812 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DUX1O43812 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms