Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.11■□□□□ 0.97
KDELR3O43731 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KDELR3O43731 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
KDELR3O43731 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.11■□□□□ 0.97
KDELR3O43731 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
KDELR3O43731 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
KDELR3O43731 AC116050.2-201ENST00000612102 1779 ntBASIC21.11■□□□□ 0.97
KDELR3O43731 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
KDELR3O43731 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KDELR3O43731 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KDELR3O43731 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.11■□□□□ 0.97
KDELR3O43731 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.11■□□□□ 0.97
KDELR3O43731 AC016405.3-201ENST00000607710 860 ntBASIC21.11■□□□□ 0.97
KDELR3O43731 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.11■□□□□ 0.97
KDELR3O43731 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.11■□□□□ 0.97
KDELR3O43731 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KDELR3O43731 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
KDELR3O43731 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
KDELR3O43731 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KDELR3O43731 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KDELR3O43731 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KDELR3O43731 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KDELR3O43731 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KDELR3O43731 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KDELR3O43731 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.1■□□□□ 0.97
KDELR3O43731 AC007322.3-201ENST00000426526 701 ntBASIC21.1■□□□□ 0.97
KDELR3O43731 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.1■□□□□ 0.97
KDELR3O43731 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.1■□□□□ 0.97
KDELR3O43731 AC133552.2-202ENST00000575694 574 ntBASIC21.1■□□□□ 0.97
KDELR3O43731 AC069236.1-201ENST00000604339 616 ntBASIC21.1■□□□□ 0.97
KDELR3O43731 FAM21FP-204ENST00000608637 956 ntBASIC21.1■□□□□ 0.97
KDELR3O43731 AF106564.1-201ENST00000607058 2553 ntBASIC21.1■□□□□ 0.97
KDELR3O43731 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KDELR3O43731 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KDELR3O43731 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
KDELR3O43731 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
KDELR3O43731 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KDELR3O43731 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
KDELR3O43731 NCF1B-203ENST00000435988 1254 ntBASIC21.09■□□□□ 0.97
KDELR3O43731 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.09■□□□□ 0.97
KDELR3O43731 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.09■□□□□ 0.97
KDELR3O43731 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.09■□□□□ 0.97
KDELR3O43731 OR10C1-204ENST00000622521 1039 ntBASIC21.09■□□□□ 0.97
KDELR3O43731 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
KDELR3O43731 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.08■□□□□ 0.97
KDELR3O43731 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.08■□□□□ 0.97
KDELR3O43731 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KDELR3O43731 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KDELR3O43731 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
KDELR3O43731 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
KDELR3O43731 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.08■□□□□ 0.97
KDELR3O43731 RARRES2P4-201ENST00000514074 484 ntBASIC21.08■□□□□ 0.97
KDELR3O43731 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.08■□□□□ 0.97
KDELR3O43731 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
KDELR3O43731 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.08■□□□□ 0.97
KDELR3O43731 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.08■□□□□ 0.97
KDELR3O43731 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.08■□□□□ 0.97
KDELR3O43731 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.08■□□□□ 0.97
KDELR3O43731 AC008694.1-202ENST00000636953 945 ntBASIC21.08■□□□□ 0.97
KDELR3O43731 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
KDELR3O43731 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.08■□□□□ 0.96
KDELR3O43731 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KDELR3O43731 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KDELR3O43731 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KDELR3O43731 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
KDELR3O43731 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KDELR3O43731 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
KDELR3O43731 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KDELR3O43731 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.07■□□□□ 0.96
KDELR3O43731 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
KDELR3O43731 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.07■□□□□ 0.96
KDELR3O43731 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.07■□□□□ 0.96
KDELR3O43731 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.06■□□□□ 0.96
KDELR3O43731 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KDELR3O43731 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KDELR3O43731 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
KDELR3O43731 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
KDELR3O43731 AC007375.3-201ENST00000600936 2314 ntBASIC21.06■□□□□ 0.96
KDELR3O43731 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.06■□□□□ 0.96
KDELR3O43731 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
KDELR3O43731 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.06■□□□□ 0.96
KDELR3O43731 AC083906.2-201ENST00000511578 360 ntBASIC21.06■□□□□ 0.96
KDELR3O43731 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.06■□□□□ 0.96
KDELR3O43731 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KDELR3O43731 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.06■□□□□ 0.96
KDELR3O43731 AL121832.2-201ENST00000610979 668 ntBASIC21.06■□□□□ 0.96
KDELR3O43731 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
KDELR3O43731 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KDELR3O43731 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KDELR3O43731 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.05■□□□□ 0.96
KDELR3O43731 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.05■□□□□ 0.96
KDELR3O43731 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KDELR3O43731 AC011484.1-201ENST00000377652 1995 ntBASIC21.05■□□□□ 0.96
KDELR3O43731 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.05■□□□□ 0.96
KDELR3O43731 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KDELR3O43731 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.05■□□□□ 0.96
KDELR3O43731 AL512625.2-201ENST00000417533 625 ntBASIC21.05■□□□□ 0.96
KDELR3O43731 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KDELR3O43731 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.05■□□□□ 0.96
KDELR3O43731 AF201337.1-201ENST00000520239 748 ntBASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms