Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNF13O43567 AC079140.4-201ENST00000507448 529 ntBASIC18.83■□□□□ 0.6
RNF13O43567 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.83■□□□□ 0.6
RNF13O43567 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RNF13O43567 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.6
RNF13O43567 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF13O43567 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNF13O43567 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
RNF13O43567 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNF13O43567 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF13O43567 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNF13O43567 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNF13O43567 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF13O43567 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF13O43567 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
RNF13O43567 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNF13O43567 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF13O43567 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RNF13O43567 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF13O43567 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF13O43567 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF13O43567 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RNF13O43567 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF13O43567 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.82■□□□□ 0.6
RNF13O43567 AC027612.3-201ENST00000413684 1047 ntBASIC18.82■□□□□ 0.6
RNF13O43567 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF13O43567 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF13O43567 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF13O43567 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF13O43567 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
RNF13O43567 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RNF13O43567 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF13O43567 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF13O43567 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF13O43567 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.82■□□□□ 0.6
RNF13O43567 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF13O43567 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF13O43567 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF13O43567 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF13O43567 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF13O43567 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF13O43567 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.81■□□□□ 0.6
RNF13O43567 AC053503.5-201ENST00000601508 636 ntBASIC18.81■□□□□ 0.6
RNF13O43567 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF13O43567 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF13O43567 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF13O43567 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.81■□□□□ 0.6
RNF13O43567 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF13O43567 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF13O43567 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RNF13O43567 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
RNF13O43567 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF13O43567 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF13O43567 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF13O43567 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RNF13O43567 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF13O43567 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF13O43567 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF13O43567 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RNF13O43567 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF13O43567 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF13O43567 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF13O43567 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.8■□□□□ 0.6
RNF13O43567 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.8■□□□□ 0.6
RNF13O43567 EEF1DP3-203ENST00000566025 782 ntBASIC18.8■□□□□ 0.6
RNF13O43567 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF13O43567 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF13O43567 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF13O43567 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RNF13O43567 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF13O43567 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RNF13O43567 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF13O43567 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF13O43567 KRT87P-202ENST00000534226 1464 ntBASIC18.79■□□□□ 0.6
RNF13O43567 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RNF13O43567 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF13O43567 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF13O43567 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF13O43567 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF13O43567 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF13O43567 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
RNF13O43567 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
RNF13O43567 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RNF13O43567 LINC02228-203ENST00000641970 1355 ntBASIC18.79■□□□□ 0.6
RNF13O43567 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF13O43567 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RNF13O43567 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF13O43567 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF13O43567 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
RNF13O43567 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF13O43567 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF13O43567 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF13O43567 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF13O43567 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.78■□□□□ 0.6
RNF13O43567 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF13O43567 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF13O43567 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF13O43567 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF13O43567 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF13O43567 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms