Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
XRCC2O43543 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
XRCC2O43543 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
XRCC2O43543 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
XRCC2O43543 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
XRCC2O43543 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.98■□□□□ 0.47
XRCC2O43543 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.98■□□□□ 0.47
XRCC2O43543 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
XRCC2O43543 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
XRCC2O43543 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
XRCC2O43543 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.98■□□□□ 0.47
XRCC2O43543 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
XRCC2O43543 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
XRCC2O43543 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
XRCC2O43543 AC121338.2-201ENST00000622535 1744 ntBASIC17.98■□□□□ 0.47
XRCC2O43543 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
XRCC2O43543 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
XRCC2O43543 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
XRCC2O43543 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.97■□□□□ 0.47
XRCC2O43543 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
XRCC2O43543 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
XRCC2O43543 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.97■□□□□ 0.47
XRCC2O43543 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.97■□□□□ 0.47
XRCC2O43543 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.97■□□□□ 0.47
XRCC2O43543 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
XRCC2O43543 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
XRCC2O43543 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
XRCC2O43543 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
XRCC2O43543 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
XRCC2O43543 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.97■□□□□ 0.47
XRCC2O43543 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
XRCC2O43543 AC245052.3-201ENST00000450182 901 ntBASIC17.97■□□□□ 0.47
XRCC2O43543 KRT18P20-201ENST00000548986 1279 ntBASIC17.97■□□□□ 0.47
XRCC2O43543 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.97■□□□□ 0.47
XRCC2O43543 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.97■□□□□ 0.47
XRCC2O43543 AP001160.3-201ENST00000601484 763 ntBASIC17.97■□□□□ 0.47
XRCC2O43543 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
XRCC2O43543 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
XRCC2O43543 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
XRCC2O43543 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
XRCC2O43543 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
XRCC2O43543 AC006128.1-201ENST00000624704 1661 ntBASIC17.96■□□□□ 0.47
XRCC2O43543 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
XRCC2O43543 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
XRCC2O43543 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
XRCC2O43543 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.96■□□□□ 0.47
XRCC2O43543 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
XRCC2O43543 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
XRCC2O43543 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.96■□□□□ 0.47
XRCC2O43543 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.96■□□□□ 0.47
XRCC2O43543 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
XRCC2O43543 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
XRCC2O43543 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
XRCC2O43543 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
XRCC2O43543 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
XRCC2O43543 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
XRCC2O43543 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
XRCC2O43543 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.46
XRCC2O43543 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
XRCC2O43543 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
XRCC2O43543 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.95■□□□□ 0.46
XRCC2O43543 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
XRCC2O43543 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
XRCC2O43543 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
XRCC2O43543 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
XRCC2O43543 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
XRCC2O43543 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
XRCC2O43543 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
XRCC2O43543 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
XRCC2O43543 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
XRCC2O43543 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
XRCC2O43543 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
XRCC2O43543 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
XRCC2O43543 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
XRCC2O43543 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.95■□□□□ 0.46
XRCC2O43543 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.95■□□□□ 0.46
XRCC2O43543 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
XRCC2O43543 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
XRCC2O43543 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
XRCC2O43543 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
XRCC2O43543 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.94■□□□□ 0.46
XRCC2O43543 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.94■□□□□ 0.46
XRCC2O43543 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.94■□□□□ 0.46
XRCC2O43543 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
XRCC2O43543 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
XRCC2O43543 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
XRCC2O43543 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
XRCC2O43543 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.94■□□□□ 0.46
XRCC2O43543 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.94■□□□□ 0.46
XRCC2O43543 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.94■□□□□ 0.46
XRCC2O43543 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
XRCC2O43543 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
XRCC2O43543 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
XRCC2O43543 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
XRCC2O43543 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
XRCC2O43543 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
XRCC2O43543 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
XRCC2O43543 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
XRCC2O43543 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
XRCC2O43543 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms