Protein–RNA interactions for Protein: O15522

NKX2-8, Homeobox protein Nkx-2.8, humanhuman

Predictions only

Length 239 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-8O15522 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NKX2-8O15522 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.24■□□□□ 0.67
NKX2-8O15522 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
NKX2-8O15522 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NKX2-8O15522 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NKX2-8O15522 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.24■□□□□ 0.67
NKX2-8O15522 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.24■□□□□ 0.67
NKX2-8O15522 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NKX2-8O15522 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.23■□□□□ 0.67
NKX2-8O15522 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NKX2-8O15522 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.23■□□□□ 0.67
NKX2-8O15522 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.23■□□□□ 0.67
NKX2-8O15522 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NKX2-8O15522 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NKX2-8O15522 POM121L13P-201ENST00000422362 380 ntBASIC19.23■□□□□ 0.67
NKX2-8O15522 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NKX2-8O15522 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
NKX2-8O15522 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
NKX2-8O15522 REXO1L12P-201ENST00000622156 912 ntBASIC19.23■□□□□ 0.67
NKX2-8O15522 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.23■□□□□ 0.67
NKX2-8O15522 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NKX2-8O15522 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.23■□□□□ 0.67
NKX2-8O15522 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NKX2-8O15522 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NKX2-8O15522 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.23■□□□□ 0.67
NKX2-8O15522 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NKX2-8O15522 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
NKX2-8O15522 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.22■□□□□ 0.67
NKX2-8O15522 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.22■□□□□ 0.67
NKX2-8O15522 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.22■□□□□ 0.67
NKX2-8O15522 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NKX2-8O15522 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NKX2-8O15522 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.22■□□□□ 0.67
NKX2-8O15522 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NKX2-8O15522 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NKX2-8O15522 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NKX2-8O15522 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NKX2-8O15522 AC211429.1-201ENST00000415277 523 ntBASIC19.22■□□□□ 0.67
NKX2-8O15522 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.22■□□□□ 0.67
NKX2-8O15522 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NKX2-8O15522 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NKX2-8O15522 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
NKX2-8O15522 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NKX2-8O15522 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
NKX2-8O15522 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.22■□□□□ 0.67
NKX2-8O15522 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NKX2-8O15522 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NKX2-8O15522 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.21■□□□□ 0.67
NKX2-8O15522 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NKX2-8O15522 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NKX2-8O15522 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
NKX2-8O15522 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NKX2-8O15522 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NKX2-8O15522 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
NKX2-8O15522 AC105020.6-201ENST00000621523 1217 ntBASIC19.21■□□□□ 0.67
NKX2-8O15522 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NKX2-8O15522 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NKX2-8O15522 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
NKX2-8O15522 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NKX2-8O15522 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
NKX2-8O15522 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NKX2-8O15522 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.21■□□□□ 0.67
NKX2-8O15522 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NKX2-8O15522 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NKX2-8O15522 C1orf229-201ENST00000623686 2258 ntBASIC19.21■□□□□ 0.67
NKX2-8O15522 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NKX2-8O15522 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NKX2-8O15522 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NKX2-8O15522 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
NKX2-8O15522 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
NKX2-8O15522 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.2■□□□□ 0.66
NKX2-8O15522 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.2■□□□□ 0.66
NKX2-8O15522 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
NKX2-8O15522 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NKX2-8O15522 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NKX2-8O15522 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NKX2-8O15522 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NKX2-8O15522 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
NKX2-8O15522 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.2■□□□□ 0.66
NKX2-8O15522 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.2■□□□□ 0.66
NKX2-8O15522 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.2■□□□□ 0.66
NKX2-8O15522 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.2■□□□□ 0.66
NKX2-8O15522 FAM99A-202ENST00000538190 1989 ntBASIC19.2■□□□□ 0.66
NKX2-8O15522 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NKX2-8O15522 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
NKX2-8O15522 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
NKX2-8O15522 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.2■□□□□ 0.66
NKX2-8O15522 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
NKX2-8O15522 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.19■□□□□ 0.66
NKX2-8O15522 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NKX2-8O15522 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NKX2-8O15522 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NKX2-8O15522 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NKX2-8O15522 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NKX2-8O15522 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NKX2-8O15522 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.19■□□□□ 0.66
NKX2-8O15522 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.19■□□□□ 0.66
NKX2-8O15522 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.19■□□□□ 0.66
NKX2-8O15522 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NKX2-8O15522 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms