Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.77■□□□□ 0.76
RTCAO00442 AC137761.2-201ENST00000561729 223 ntBASIC19.77■□□□□ 0.76
RTCAO00442 AC145350.3-201ENST00000569033 163 ntBASIC19.77■□□□□ 0.76
RTCAO00442 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.77■□□□□ 0.76
RTCAO00442 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RTCAO00442 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RTCAO00442 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RTCAO00442 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RTCAO00442 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RTCAO00442 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTCAO00442 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTCAO00442 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTCAO00442 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RTCAO00442 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTCAO00442 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RTCAO00442 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.76■□□□□ 0.75
RTCAO00442 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTCAO00442 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RTCAO00442 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.76■□□□□ 0.75
RTCAO00442 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.76■□□□□ 0.75
RTCAO00442 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTCAO00442 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RTCAO00442 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTCAO00442 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RTCAO00442 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTCAO00442 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RTCAO00442 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTCAO00442 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTCAO00442 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTCAO00442 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.75■□□□□ 0.75
RTCAO00442 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTCAO00442 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTCAO00442 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RTCAO00442 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.75■□□□□ 0.75
RTCAO00442 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.75■□□□□ 0.75
RTCAO00442 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTCAO00442 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RTCAO00442 AC245052.3-201ENST00000450182 901 ntBASIC19.75■□□□□ 0.75
RTCAO00442 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTCAO00442 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.75■□□□□ 0.75
RTCAO00442 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.75■□□□□ 0.75
RTCAO00442 MYCNOS-205ENST00000641950 531 ntBASIC19.75■□□□□ 0.75
RTCAO00442 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RTCAO00442 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.75■□□□□ 0.75
RTCAO00442 AC121338.2-201ENST00000622535 1744 ntBASIC19.75■□□□□ 0.75
RTCAO00442 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.75■□□□□ 0.75
RTCAO00442 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
RTCAO00442 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.75■□□□□ 0.75
RTCAO00442 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.75■□□□□ 0.75
RTCAO00442 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTCAO00442 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTCAO00442 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTCAO00442 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTCAO00442 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
RTCAO00442 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.74■□□□□ 0.75
RTCAO00442 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.74■□□□□ 0.75
RTCAO00442 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.74■□□□□ 0.75
RTCAO00442 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.74■□□□□ 0.75
RTCAO00442 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.74■□□□□ 0.75
RTCAO00442 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
RTCAO00442 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RTCAO00442 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.74■□□□□ 0.75
RTCAO00442 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.74■□□□□ 0.75
RTCAO00442 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.74■□□□□ 0.75
RTCAO00442 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTCAO00442 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTCAO00442 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.74■□□□□ 0.75
RTCAO00442 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTCAO00442 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.74■□□□□ 0.75
RTCAO00442 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTCAO00442 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTCAO00442 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RTCAO00442 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTCAO00442 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTCAO00442 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RTCAO00442 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
RTCAO00442 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RTCAO00442 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.73■□□□□ 0.75
RTCAO00442 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTCAO00442 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTCAO00442 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTCAO00442 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.73■□□□□ 0.75
RTCAO00442 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.73■□□□□ 0.75
RTCAO00442 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.73■□□□□ 0.75
RTCAO00442 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RTCAO00442 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTCAO00442 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTCAO00442 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.73■□□□□ 0.75
RTCAO00442 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTCAO00442 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.73■□□□□ 0.75
RTCAO00442 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RTCAO00442 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTCAO00442 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.72■□□□□ 0.75
RTCAO00442 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RTCAO00442 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RTCAO00442 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTCAO00442 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTCAO00442 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTCAO00442 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTCAO00442 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms