Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.24■□□□□ 0.83
TAF4O00268 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TAF4O00268 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TAF4O00268 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
TAF4O00268 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.24■□□□□ 0.83
TAF4O00268 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TAF4O00268 SNORA78-201ENST00000459373 127 ntBASIC20.24■□□□□ 0.83
TAF4O00268 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
TAF4O00268 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TAF4O00268 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.24■□□□□ 0.83
TAF4O00268 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TAF4O00268 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.24■□□□□ 0.83
TAF4O00268 AC092068.2-201ENST00000590491 1708 ntBASIC20.24■□□□□ 0.83
TAF4O00268 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TAF4O00268 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TAF4O00268 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TAF4O00268 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TAF4O00268 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TAF4O00268 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TAF4O00268 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TAF4O00268 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.23■□□□□ 0.83
TAF4O00268 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.23■□□□□ 0.83
TAF4O00268 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.23■□□□□ 0.83
TAF4O00268 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.23■□□□□ 0.83
TAF4O00268 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TAF4O00268 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TAF4O00268 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TAF4O00268 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
TAF4O00268 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TAF4O00268 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TAF4O00268 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TAF4O00268 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TAF4O00268 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
TAF4O00268 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TAF4O00268 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.22■□□□□ 0.83
TAF4O00268 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.22■□□□□ 0.83
TAF4O00268 AC242852.2-201ENST00000615738 1807 ntBASIC20.22■□□□□ 0.83
TAF4O00268 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TAF4O00268 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TAF4O00268 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
TAF4O00268 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TAF4O00268 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TAF4O00268 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TAF4O00268 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TAF4O00268 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TAF4O00268 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TAF4O00268 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.21■□□□□ 0.83
TAF4O00268 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
TAF4O00268 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TAF4O00268 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TAF4O00268 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TAF4O00268 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.21■□□□□ 0.83
TAF4O00268 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TAF4O00268 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
TAF4O00268 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.21■□□□□ 0.83
TAF4O00268 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
TAF4O00268 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.21■□□□□ 0.83
TAF4O00268 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.21■□□□□ 0.83
TAF4O00268 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TAF4O00268 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TAF4O00268 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TAF4O00268 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.21■□□□□ 0.83
TAF4O00268 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.21■□□□□ 0.83
TAF4O00268 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TAF4O00268 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TAF4O00268 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TAF4O00268 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TAF4O00268 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TAF4O00268 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TAF4O00268 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TAF4O00268 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TAF4O00268 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.2■□□□□ 0.82
TAF4O00268 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TAF4O00268 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.2■□□□□ 0.82
TAF4O00268 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.2■□□□□ 0.82
TAF4O00268 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.2■□□□□ 0.82
TAF4O00268 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.2■□□□□ 0.82
TAF4O00268 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TAF4O00268 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
TAF4O00268 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TAF4O00268 AC055733.4-201ENST00000638462 1354 ntBASIC20.2■□□□□ 0.82
TAF4O00268 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TAF4O00268 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TAF4O00268 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TAF4O00268 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TAF4O00268 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TAF4O00268 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
TAF4O00268 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
TAF4O00268 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TAF4O00268 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.19■□□□□ 0.82
TAF4O00268 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TAF4O00268 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TAF4O00268 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
TAF4O00268 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.19■□□□□ 0.82
TAF4O00268 RPPH1-201ENST00000516869 333 ntBASIC20.19■□□□□ 0.82
TAF4O00268 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.19■□□□□ 0.82
TAF4O00268 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.19■□□□□ 0.82
TAF4O00268 AC008403.3-201ENST00000598924 454 ntBASIC20.19■□□□□ 0.82
TAF4O00268 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.19■□□□□ 0.82
TAF4O00268 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms