Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AC027702.1-201ENST00000563810 1770 ntBASIC18.38■□□□□ 0.53
NPIPB4C9JG80 PKD1P6-201ENST00000343738 4769 ntBASIC18.38■□□□□ 0.53
NPIPB4C9JG80 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
NPIPB4C9JG80 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPIPB4C9JG80 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
NPIPB4C9JG80 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.38■□□□□ 0.53
NPIPB4C9JG80 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.38■□□□□ 0.53
NPIPB4C9JG80 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.38■□□□□ 0.53
NPIPB4C9JG80 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.38■□□□□ 0.53
NPIPB4C9JG80 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.38■□□□□ 0.53
NPIPB4C9JG80 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
NPIPB4C9JG80 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NPIPB4C9JG80 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.38■□□□□ 0.53
NPIPB4C9JG80 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.38■□□□□ 0.53
NPIPB4C9JG80 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.38■□□□□ 0.53
NPIPB4C9JG80 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.38■□□□□ 0.53
NPIPB4C9JG80 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.38■□□□□ 0.53
NPIPB4C9JG80 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
NPIPB4C9JG80 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPB4C9JG80 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPB4C9JG80 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPB4C9JG80 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPB4C9JG80 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPB4C9JG80 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPB4C9JG80 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.37■□□□□ 0.53
NPIPB4C9JG80 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPB4C9JG80 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.37■□□□□ 0.53
NPIPB4C9JG80 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.37■□□□□ 0.53
NPIPB4C9JG80 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPB4C9JG80 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPB4C9JG80 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPB4C9JG80 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPB4C9JG80 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPB4C9JG80 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.37■□□□□ 0.53
NPIPB4C9JG80 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.37■□□□□ 0.53
NPIPB4C9JG80 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPB4C9JG80 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.37■□□□□ 0.53
NPIPB4C9JG80 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
NPIPB4C9JG80 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPB4C9JG80 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPB4C9JG80 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPB4C9JG80 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPB4C9JG80 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPB4C9JG80 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
NPIPB4C9JG80 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPB4C9JG80 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.36■□□□□ 0.53
NPIPB4C9JG80 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.36■□□□□ 0.53
NPIPB4C9JG80 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPB4C9JG80 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.36■□□□□ 0.53
NPIPB4C9JG80 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.36■□□□□ 0.53
NPIPB4C9JG80 AC091799.1-201ENST00000422823 811 ntBASIC18.36■□□□□ 0.53
NPIPB4C9JG80 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPB4C9JG80 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NPIPB4C9JG80 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NPIPB4C9JG80 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPB4C9JG80 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.36■□□□□ 0.53
NPIPB4C9JG80 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPB4C9JG80 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPB4C9JG80 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPB4C9JG80 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPB4C9JG80 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPB4C9JG80 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.35■□□□□ 0.53
NPIPB4C9JG80 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.35■□□□□ 0.53
NPIPB4C9JG80 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPB4C9JG80 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.35■□□□□ 0.53
NPIPB4C9JG80 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPB4C9JG80 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPB4C9JG80 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPB4C9JG80 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPB4C9JG80 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPB4C9JG80 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.35■□□□□ 0.53
NPIPB4C9JG80 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPB4C9JG80 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPB4C9JG80 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.35■□□□□ 0.53
NPIPB4C9JG80 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.35■□□□□ 0.53
NPIPB4C9JG80 NTF6G-201ENST00000591094 616 ntBASIC18.35■□□□□ 0.53
NPIPB4C9JG80 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
NPIPB4C9JG80 MYCNOS-205ENST00000641950 531 ntBASIC18.35■□□□□ 0.53
NPIPB4C9JG80 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.35■□□□□ 0.53
NPIPB4C9JG80 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
NPIPB4C9JG80 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
NPIPB4C9JG80 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
NPIPB4C9JG80 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPB4C9JG80 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPB4C9JG80 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPB4C9JG80 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
NPIPB4C9JG80 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPB4C9JG80 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
NPIPB4C9JG80 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPB4C9JG80 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPB4C9JG80 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.34■□□□□ 0.53
NPIPB4C9JG80 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPB4C9JG80 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
NPIPB4C9JG80 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPB4C9JG80 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.34■□□□□ 0.53
NPIPB4C9JG80 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.34■□□□□ 0.53
NPIPB4C9JG80 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NPIPB4C9JG80 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPB4C9JG80 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
NPIPB4C9JG80 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms