Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TRIM6-TRIM34B2RNG4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
TRIM6-TRIM34B2RNG4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
TRIM6-TRIM34B2RNG4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TRIM6-TRIM34B2RNG4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
TRIM6-TRIM34B2RNG4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TRIM6-TRIM34B2RNG4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC25.33■■□□□ 1.65
TRIM6-TRIM34B2RNG4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
TRIM6-TRIM34B2RNG4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
TRIM6-TRIM34B2RNG4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
TRIM6-TRIM34B2RNG4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
TRIM6-TRIM34B2RNG4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC25.33■■□□□ 1.65
TRIM6-TRIM34B2RNG4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
TRIM6-TRIM34B2RNG4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC25.33■■□□□ 1.65
TRIM6-TRIM34B2RNG4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
TRIM6-TRIM34B2RNG4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
TRIM6-TRIM34B2RNG4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
TRIM6-TRIM34B2RNG4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC25.32■■□□□ 1.64
TRIM6-TRIM34B2RNG4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
TRIM6-TRIM34B2RNG4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC25.32■■□□□ 1.64
TRIM6-TRIM34B2RNG4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC25.32■■□□□ 1.64
TRIM6-TRIM34B2RNG4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC25.32■■□□□ 1.64
TRIM6-TRIM34B2RNG4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
TRIM6-TRIM34B2RNG4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
TRIM6-TRIM34B2RNG4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC25.32■■□□□ 1.64
TRIM6-TRIM34B2RNG4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC25.32■■□□□ 1.64
TRIM6-TRIM34B2RNG4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
TRIM6-TRIM34B2RNG4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
TRIM6-TRIM34B2RNG4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC25.32■■□□□ 1.64
TRIM6-TRIM34B2RNG4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
TRIM6-TRIM34B2RNG4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
TRIM6-TRIM34B2RNG4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
TRIM6-TRIM34B2RNG4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC25.31■■□□□ 1.64
TRIM6-TRIM34B2RNG4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TRIM6-TRIM34B2RNG4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TRIM6-TRIM34B2RNG4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TRIM6-TRIM34B2RNG4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
TRIM6-TRIM34B2RNG4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
TRIM6-TRIM34B2RNG4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TRIM6-TRIM34B2RNG4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TRIM6-TRIM34B2RNG4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TRIM6-TRIM34B2RNG4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
TRIM6-TRIM34B2RNG4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TRIM6-TRIM34B2RNG4 KRT18P20-201ENST00000548986 1279 ntBASIC25.31■■□□□ 1.64
TRIM6-TRIM34B2RNG4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
TRIM6-TRIM34B2RNG4 RARRES2P11-201ENST00000635158 484 ntBASIC25.31■■□□□ 1.64
TRIM6-TRIM34B2RNG4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC25.31■■□□□ 1.64
TRIM6-TRIM34B2RNG4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC25.31■■□□□ 1.64
TRIM6-TRIM34B2RNG4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
TRIM6-TRIM34B2RNG4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC25.31■■□□□ 1.64
TRIM6-TRIM34B2RNG4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC25.31■■□□□ 1.64
TRIM6-TRIM34B2RNG4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TRIM6-TRIM34B2RNG4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC25.31■■□□□ 1.64
TRIM6-TRIM34B2RNG4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC25.31■■□□□ 1.64
TRIM6-TRIM34B2RNG4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
TRIM6-TRIM34B2RNG4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
TRIM6-TRIM34B2RNG4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
TRIM6-TRIM34B2RNG4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
TRIM6-TRIM34B2RNG4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC25.3■■□□□ 1.64
TRIM6-TRIM34B2RNG4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC25.3■■□□□ 1.64
TRIM6-TRIM34B2RNG4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC25.3■■□□□ 1.64
TRIM6-TRIM34B2RNG4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
TRIM6-TRIM34B2RNG4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
TRIM6-TRIM34B2RNG4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC25.3■■□□□ 1.64
TRIM6-TRIM34B2RNG4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
TRIM6-TRIM34B2RNG4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
TRIM6-TRIM34B2RNG4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TRIM6-TRIM34B2RNG4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TRIM6-TRIM34B2RNG4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC25.29■■□□□ 1.64
TRIM6-TRIM34B2RNG4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
TRIM6-TRIM34B2RNG4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TRIM6-TRIM34B2RNG4 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC25.29■■□□□ 1.64
TRIM6-TRIM34B2RNG4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
TRIM6-TRIM34B2RNG4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
TRIM6-TRIM34B2RNG4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
TRIM6-TRIM34B2RNG4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
TRIM6-TRIM34B2RNG4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
TRIM6-TRIM34B2RNG4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
TRIM6-TRIM34B2RNG4 KRT18P5-201ENST00000436075 1291 ntBASIC25.29■■□□□ 1.64
TRIM6-TRIM34B2RNG4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC25.29■■□□□ 1.64
TRIM6-TRIM34B2RNG4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC25.29■■□□□ 1.64
TRIM6-TRIM34B2RNG4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC25.29■■□□□ 1.64
TRIM6-TRIM34B2RNG4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
TRIM6-TRIM34B2RNG4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TRIM6-TRIM34B2RNG4 AC006128.1-201ENST00000624704 1661 ntBASIC25.29■■□□□ 1.64
TRIM6-TRIM34B2RNG4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC25.29■■□□□ 1.64
TRIM6-TRIM34B2RNG4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
TRIM6-TRIM34B2RNG4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC25.29■■□□□ 1.64
TRIM6-TRIM34B2RNG4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
TRIM6-TRIM34B2RNG4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TRIM6-TRIM34B2RNG4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC25.28■■□□□ 1.64
TRIM6-TRIM34B2RNG4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
TRIM6-TRIM34B2RNG4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
TRIM6-TRIM34B2RNG4 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TRIM6-TRIM34B2RNG4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TRIM6-TRIM34B2RNG4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TRIM6-TRIM34B2RNG4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
TRIM6-TRIM34B2RNG4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
TRIM6-TRIM34B2RNG4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TRIM6-TRIM34B2RNG4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms