Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
YJEFN3A6XGL0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
YJEFN3A6XGL0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
YJEFN3A6XGL0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
YJEFN3A6XGL0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.69■■□□□ 1.06
YJEFN3A6XGL0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.69■■□□□ 1.06
YJEFN3A6XGL0 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
YJEFN3A6XGL0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
YJEFN3A6XGL0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
YJEFN3A6XGL0 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.69■■□□□ 1.06
YJEFN3A6XGL0 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
YJEFN3A6XGL0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.69■■□□□ 1.06
YJEFN3A6XGL0 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
YJEFN3A6XGL0 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.69■■□□□ 1.06
YJEFN3A6XGL0 NCF1B-203ENST00000435988 1254 ntBASIC21.69■■□□□ 1.06
YJEFN3A6XGL0 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.69■■□□□ 1.06
YJEFN3A6XGL0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
YJEFN3A6XGL0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
YJEFN3A6XGL0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.69■■□□□ 1.06
YJEFN3A6XGL0 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.69■■□□□ 1.06
YJEFN3A6XGL0 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
YJEFN3A6XGL0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
YJEFN3A6XGL0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
YJEFN3A6XGL0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
YJEFN3A6XGL0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
YJEFN3A6XGL0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
YJEFN3A6XGL0 AC005229.4-201ENST00000610085 2198 ntBASIC21.68■■□□□ 1.06
YJEFN3A6XGL0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
YJEFN3A6XGL0 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
YJEFN3A6XGL0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
YJEFN3A6XGL0 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
YJEFN3A6XGL0 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.68■■□□□ 1.06
YJEFN3A6XGL0 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.68■■□□□ 1.06
YJEFN3A6XGL0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.68■■□□□ 1.06
YJEFN3A6XGL0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.68■■□□□ 1.06
YJEFN3A6XGL0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.68■■□□□ 1.06
YJEFN3A6XGL0 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
YJEFN3A6XGL0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
YJEFN3A6XGL0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
YJEFN3A6XGL0 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
YJEFN3A6XGL0 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
YJEFN3A6XGL0 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
YJEFN3A6XGL0 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.67■■□□□ 1.06
YJEFN3A6XGL0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
YJEFN3A6XGL0 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
YJEFN3A6XGL0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
YJEFN3A6XGL0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.66■■□□□ 1.06
YJEFN3A6XGL0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
YJEFN3A6XGL0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
YJEFN3A6XGL0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
YJEFN3A6XGL0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.66■■□□□ 1.06
YJEFN3A6XGL0 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
YJEFN3A6XGL0 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
YJEFN3A6XGL0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.66■■□□□ 1.06
YJEFN3A6XGL0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
YJEFN3A6XGL0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.66■■□□□ 1.06
YJEFN3A6XGL0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
YJEFN3A6XGL0 AC133552.2-202ENST00000575694 574 ntBASIC21.66■■□□□ 1.06
YJEFN3A6XGL0 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.66■■□□□ 1.06
YJEFN3A6XGL0 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
YJEFN3A6XGL0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
YJEFN3A6XGL0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
YJEFN3A6XGL0 AC116050.2-201ENST00000612102 1779 ntBASIC21.66■■□□□ 1.06
YJEFN3A6XGL0 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
YJEFN3A6XGL0 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
YJEFN3A6XGL0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
YJEFN3A6XGL0 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
YJEFN3A6XGL0 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
YJEFN3A6XGL0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
YJEFN3A6XGL0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
YJEFN3A6XGL0 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.65■■□□□ 1.06
YJEFN3A6XGL0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.65■■□□□ 1.06
YJEFN3A6XGL0 CDV3P1-201ENST00000471403 739 ntBASIC21.65■■□□□ 1.06
YJEFN3A6XGL0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
YJEFN3A6XGL0 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.65■■□□□ 1.06
YJEFN3A6XGL0 AC083906.2-201ENST00000511578 360 ntBASIC21.65■■□□□ 1.06
YJEFN3A6XGL0 RARRES2P4-201ENST00000514074 484 ntBASIC21.65■■□□□ 1.06
YJEFN3A6XGL0 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.65■■□□□ 1.06
YJEFN3A6XGL0 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
YJEFN3A6XGL0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
YJEFN3A6XGL0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
YJEFN3A6XGL0 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
YJEFN3A6XGL0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
YJEFN3A6XGL0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
YJEFN3A6XGL0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
YJEFN3A6XGL0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
YJEFN3A6XGL0 AC007322.3-201ENST00000426526 701 ntBASIC21.64■■□□□ 1.05
YJEFN3A6XGL0 AC093787.1-201ENST00000450396 207 ntBASIC21.64■■□□□ 1.05
YJEFN3A6XGL0 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.64■■□□□ 1.05
YJEFN3A6XGL0 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.64■■□□□ 1.05
YJEFN3A6XGL0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.64■■□□□ 1.05
YJEFN3A6XGL0 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.64■■□□□ 1.05
YJEFN3A6XGL0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.64■■□□□ 1.05
YJEFN3A6XGL0 AC069236.1-201ENST00000604339 616 ntBASIC21.64■■□□□ 1.05
YJEFN3A6XGL0 FAM21FP-204ENST00000608637 956 ntBASIC21.64■■□□□ 1.05
YJEFN3A6XGL0 AL121832.2-201ENST00000610979 668 ntBASIC21.64■■□□□ 1.05
YJEFN3A6XGL0 OR10C1-204ENST00000622521 1039 ntBASIC21.64■■□□□ 1.05
YJEFN3A6XGL0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
YJEFN3A6XGL0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
YJEFN3A6XGL0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms