Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.1■□□□□ 0.49
SHISA3A0PJX4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SHISA3A0PJX4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SHISA3A0PJX4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.1■□□□□ 0.49
SHISA3A0PJX4 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.1■□□□□ 0.49
SHISA3A0PJX4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
SHISA3A0PJX4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHISA3A0PJX4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHISA3A0PJX4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHISA3A0PJX4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SHISA3A0PJX4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHISA3A0PJX4 BX005040.4-201ENST00000637145 1518 ntBASIC18.09■□□□□ 0.49
SHISA3A0PJX4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
SHISA3A0PJX4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHISA3A0PJX4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHISA3A0PJX4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHISA3A0PJX4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHISA3A0PJX4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHISA3A0PJX4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.09■□□□□ 0.49
SHISA3A0PJX4 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.09■□□□□ 0.49
SHISA3A0PJX4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHISA3A0PJX4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHISA3A0PJX4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHISA3A0PJX4 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHISA3A0PJX4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
SHISA3A0PJX4 UNC93B8-201ENST00000511903 705 ntBASIC18.09■□□□□ 0.49
SHISA3A0PJX4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.09■□□□□ 0.49
SHISA3A0PJX4 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHISA3A0PJX4 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHISA3A0PJX4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHISA3A0PJX4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SHISA3A0PJX4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.09■□□□□ 0.49
SHISA3A0PJX4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SHISA3A0PJX4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SHISA3A0PJX4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHISA3A0PJX4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHISA3A0PJX4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SHISA3A0PJX4 AL158211.5-201ENST00000623583 2518 ntBASIC18.09■□□□□ 0.49
SHISA3A0PJX4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHISA3A0PJX4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHISA3A0PJX4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SHISA3A0PJX4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SHISA3A0PJX4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
SHISA3A0PJX4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.08■□□□□ 0.49
SHISA3A0PJX4 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SHISA3A0PJX4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.08■□□□□ 0.49
SHISA3A0PJX4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SHISA3A0PJX4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
SHISA3A0PJX4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
SHISA3A0PJX4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SHISA3A0PJX4 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHISA3A0PJX4 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
SHISA3A0PJX4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.08■□□□□ 0.48
SHISA3A0PJX4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
SHISA3A0PJX4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.08■□□□□ 0.48
SHISA3A0PJX4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHISA3A0PJX4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
SHISA3A0PJX4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
SHISA3A0PJX4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHISA3A0PJX4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.08■□□□□ 0.48
SHISA3A0PJX4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHISA3A0PJX4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.08■□□□□ 0.48
SHISA3A0PJX4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.08■□□□□ 0.48
SHISA3A0PJX4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHISA3A0PJX4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHISA3A0PJX4 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHISA3A0PJX4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.07■□□□□ 0.48
SHISA3A0PJX4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHISA3A0PJX4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHISA3A0PJX4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHISA3A0PJX4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.07■□□□□ 0.48
SHISA3A0PJX4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHISA3A0PJX4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.07■□□□□ 0.48
SHISA3A0PJX4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SHISA3A0PJX4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHISA3A0PJX4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SHISA3A0PJX4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SHISA3A0PJX4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHISA3A0PJX4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.07■□□□□ 0.48
SHISA3A0PJX4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHISA3A0PJX4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.07■□□□□ 0.48
SHISA3A0PJX4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHISA3A0PJX4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SHISA3A0PJX4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SHISA3A0PJX4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SHISA3A0PJX4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHISA3A0PJX4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHISA3A0PJX4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.06■□□□□ 0.48
SHISA3A0PJX4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SHISA3A0PJX4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHISA3A0PJX4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHISA3A0PJX4 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.06■□□□□ 0.48
SHISA3A0PJX4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SHISA3A0PJX4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.06■□□□□ 0.48
SHISA3A0PJX4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.06■□□□□ 0.48
SHISA3A0PJX4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.06■□□□□ 0.48
SHISA3A0PJX4 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.06■□□□□ 0.48
SHISA3A0PJX4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHISA3A0PJX4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHISA3A0PJX4 BX323043.1-201ENST00000641006 1765 ntBASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms