Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF103-CHMP3A0A140T963 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF103-CHMP3A0A140T963 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF103-CHMP3A0A140T963 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF103-CHMP3A0A140T963 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
RNF103-CHMP3A0A140T963 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
RNF103-CHMP3A0A140T963 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
RNF103-CHMP3A0A140T963 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF103-CHMP3A0A140T963 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF103-CHMP3A0A140T963 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF103-CHMP3A0A140T963 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.89■□□□□ 0.77
RNF103-CHMP3A0A140T963 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RNF103-CHMP3A0A140T963 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.89■□□□□ 0.77
RNF103-CHMP3A0A140T963 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
RNF103-CHMP3A0A140T963 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.89■□□□□ 0.77
RNF103-CHMP3A0A140T963 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF103-CHMP3A0A140T963 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
RNF103-CHMP3A0A140T963 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.89■□□□□ 0.77
RNF103-CHMP3A0A140T963 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF103-CHMP3A0A140T963 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
RNF103-CHMP3A0A140T963 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
RNF103-CHMP3A0A140T963 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF103-CHMP3A0A140T963 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF103-CHMP3A0A140T963 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF103-CHMP3A0A140T963 TSPY26P-201ENST00000476365 1326 ntBASIC19.88■□□□□ 0.77
RNF103-CHMP3A0A140T963 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF103-CHMP3A0A140T963 AP001330.3-201ENST00000520123 633 ntBASIC19.88■□□□□ 0.77
RNF103-CHMP3A0A140T963 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF103-CHMP3A0A140T963 AC106739.1-201ENST00000617035 715 ntBASIC19.88■□□□□ 0.77
RNF103-CHMP3A0A140T963 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RNF103-CHMP3A0A140T963 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF103-CHMP3A0A140T963 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF103-CHMP3A0A140T963 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
RNF103-CHMP3A0A140T963 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF103-CHMP3A0A140T963 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF103-CHMP3A0A140T963 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF103-CHMP3A0A140T963 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.88■□□□□ 0.77
RNF103-CHMP3A0A140T963 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.88■□□□□ 0.77
RNF103-CHMP3A0A140T963 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.88■□□□□ 0.77
RNF103-CHMP3A0A140T963 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.88■□□□□ 0.77
RNF103-CHMP3A0A140T963 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF103-CHMP3A0A140T963 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RNF103-CHMP3A0A140T963 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF103-CHMP3A0A140T963 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF103-CHMP3A0A140T963 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF103-CHMP3A0A140T963 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.87■□□□□ 0.77
RNF103-CHMP3A0A140T963 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF103-CHMP3A0A140T963 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF103-CHMP3A0A140T963 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF103-CHMP3A0A140T963 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF103-CHMP3A0A140T963 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF103-CHMP3A0A140T963 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RNF103-CHMP3A0A140T963 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
RNF103-CHMP3A0A140T963 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
RNF103-CHMP3A0A140T963 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF103-CHMP3A0A140T963 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
RNF103-CHMP3A0A140T963 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF103-CHMP3A0A140T963 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF103-CHMP3A0A140T963 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF103-CHMP3A0A140T963 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
RNF103-CHMP3A0A140T963 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF103-CHMP3A0A140T963 EDA-201ENST00000338901 1233 ntBASIC19.86■□□□□ 0.77
RNF103-CHMP3A0A140T963 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF103-CHMP3A0A140T963 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.86■□□□□ 0.77
RNF103-CHMP3A0A140T963 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.86■□□□□ 0.77
RNF103-CHMP3A0A140T963 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.86■□□□□ 0.77
RNF103-CHMP3A0A140T963 AC105233.4-201ENST00000642045 216 ntBASIC19.86■□□□□ 0.77
RNF103-CHMP3A0A140T963 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF103-CHMP3A0A140T963 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF103-CHMP3A0A140T963 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF103-CHMP3A0A140T963 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RNF103-CHMP3A0A140T963 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF103-CHMP3A0A140T963 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF103-CHMP3A0A140T963 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
RNF103-CHMP3A0A140T963 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF103-CHMP3A0A140T963 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.85■□□□□ 0.77
RNF103-CHMP3A0A140T963 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.85■□□□□ 0.77
RNF103-CHMP3A0A140T963 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
RNF103-CHMP3A0A140T963 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RNF103-CHMP3A0A140T963 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF103-CHMP3A0A140T963 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
RNF103-CHMP3A0A140T963 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF103-CHMP3A0A140T963 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF103-CHMP3A0A140T963 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.85■□□□□ 0.77
RNF103-CHMP3A0A140T963 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.85■□□□□ 0.77
RNF103-CHMP3A0A140T963 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.85■□□□□ 0.77
RNF103-CHMP3A0A140T963 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.85■□□□□ 0.77
RNF103-CHMP3A0A140T963 AC110285.6-201ENST00000617652 491 ntBASIC19.85■□□□□ 0.77
RNF103-CHMP3A0A140T963 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.85■□□□□ 0.77
RNF103-CHMP3A0A140T963 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF103-CHMP3A0A140T963 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNF103-CHMP3A0A140T963 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF103-CHMP3A0A140T963 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNF103-CHMP3A0A140T963 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF103-CHMP3A0A140T963 AC009237.3-201ENST00000393279 1427 ntBASIC19.85■□□□□ 0.77
RNF103-CHMP3A0A140T963 AL391422.3-201ENST00000603791 2761 ntBASIC19.84■□□□□ 0.77
RNF103-CHMP3A0A140T963 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF103-CHMP3A0A140T963 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.84■□□□□ 0.77
RNF103-CHMP3A0A140T963 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF103-CHMP3A0A140T963 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms