Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 MIR4785-201ENST00000585005 73 ntBASIC20.67■□□□□ 0.9
CCDC163A0A0D9SF12 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC163A0A0D9SF12 AC124016.1-201ENST00000609552 612 ntBASIC20.67■□□□□ 0.9
CCDC163A0A0D9SF12 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC163A0A0D9SF12 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC163A0A0D9SF12 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC163A0A0D9SF12 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC163A0A0D9SF12 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC163A0A0D9SF12 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC163A0A0D9SF12 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC163A0A0D9SF12 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC163A0A0D9SF12 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC163A0A0D9SF12 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CCDC163A0A0D9SF12 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CCDC163A0A0D9SF12 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC163A0A0D9SF12 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC163A0A0D9SF12 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC163A0A0D9SF12 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
CCDC163A0A0D9SF12 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC163A0A0D9SF12 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC163A0A0D9SF12 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC163A0A0D9SF12 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC163A0A0D9SF12 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC163A0A0D9SF12 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC163A0A0D9SF12 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CCDC163A0A0D9SF12 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC163A0A0D9SF12 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CCDC163A0A0D9SF12 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC163A0A0D9SF12 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC163A0A0D9SF12 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC163A0A0D9SF12 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CCDC163A0A0D9SF12 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CCDC163A0A0D9SF12 C11orf96-202ENST00000528572 1834 ntBASIC20.65■□□□□ 0.9
CCDC163A0A0D9SF12 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC163A0A0D9SF12 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC163A0A0D9SF12 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC163A0A0D9SF12 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC163A0A0D9SF12 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC163A0A0D9SF12 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CCDC163A0A0D9SF12 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC163A0A0D9SF12 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CCDC163A0A0D9SF12 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC163A0A0D9SF12 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC163A0A0D9SF12 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.65■□□□□ 0.9
CCDC163A0A0D9SF12 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC163A0A0D9SF12 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.65■□□□□ 0.9
CCDC163A0A0D9SF12 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.65■□□□□ 0.9
CCDC163A0A0D9SF12 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.65■□□□□ 0.9
CCDC163A0A0D9SF12 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CCDC163A0A0D9SF12 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC163A0A0D9SF12 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.64■□□□□ 0.9
CCDC163A0A0D9SF12 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.64■□□□□ 0.9
CCDC163A0A0D9SF12 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.64■□□□□ 0.9
CCDC163A0A0D9SF12 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC163A0A0D9SF12 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC163A0A0D9SF12 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC163A0A0D9SF12 TSPY7P-201ENST00000431358 1114 ntBASIC20.64■□□□□ 0.89
CCDC163A0A0D9SF12 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC163A0A0D9SF12 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC163A0A0D9SF12 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC163A0A0D9SF12 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC163A0A0D9SF12 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC163A0A0D9SF12 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.64■□□□□ 0.89
CCDC163A0A0D9SF12 AC110285.5-201ENST00000611501 352 ntBASIC20.64■□□□□ 0.89
CCDC163A0A0D9SF12 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC163A0A0D9SF12 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC163A0A0D9SF12 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC163A0A0D9SF12 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC163A0A0D9SF12 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC163A0A0D9SF12 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC163A0A0D9SF12 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC163A0A0D9SF12 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.63■□□□□ 0.89
CCDC163A0A0D9SF12 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC163A0A0D9SF12 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC163A0A0D9SF12 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CCDC163A0A0D9SF12 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC163A0A0D9SF12 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.63■□□□□ 0.89
CCDC163A0A0D9SF12 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.63■□□□□ 0.89
CCDC163A0A0D9SF12 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC163A0A0D9SF12 AC120498.8-201ENST00000614275 531 ntBASIC20.63■□□□□ 0.89
CCDC163A0A0D9SF12 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC163A0A0D9SF12 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC163A0A0D9SF12 AC093323.1-202ENST00000635031 2045 ntBASIC20.63■□□□□ 0.89
CCDC163A0A0D9SF12 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CCDC163A0A0D9SF12 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC163A0A0D9SF12 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
CCDC163A0A0D9SF12 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC163A0A0D9SF12 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC163A0A0D9SF12 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CCDC163A0A0D9SF12 AC239809.2-201ENST00000415381 517 ntBASIC20.62■□□□□ 0.89
CCDC163A0A0D9SF12 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.62■□□□□ 0.89
CCDC163A0A0D9SF12 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC163A0A0D9SF12 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC163A0A0D9SF12 KRT18P21-201ENST00000515767 1272 ntBASIC20.62■□□□□ 0.89
CCDC163A0A0D9SF12 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.62■□□□□ 0.89
CCDC163A0A0D9SF12 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.62■□□□□ 0.89
CCDC163A0A0D9SF12 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC163A0A0D9SF12 AC097493.4-201ENST00000641197 219 ntBASIC20.62■□□□□ 0.89
CCDC163A0A0D9SF12 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC163A0A0D9SF12 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms