Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV3A0A0B4J244 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV3A0A0B4J244 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAV3A0A0B4J244 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
TRAV3A0A0B4J244 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV3A0A0B4J244 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV3A0A0B4J244 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV3A0A0B4J244 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAV3A0A0B4J244 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV3A0A0B4J244 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV3A0A0B4J244 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAV3A0A0B4J244 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
TRAV3A0A0B4J244 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAV3A0A0B4J244 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
TRAV3A0A0B4J244 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
TRAV3A0A0B4J244 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV3A0A0B4J244 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV3A0A0B4J244 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAV3A0A0B4J244 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.68■□□□□ 0.26
TRAV3A0A0B4J244 TPRG1LP1-201ENST00000598702 760 ntBASIC16.68■□□□□ 0.26
TRAV3A0A0B4J244 AC053503.5-201ENST00000601508 636 ntBASIC16.68■□□□□ 0.26
TRAV3A0A0B4J244 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAV3A0A0B4J244 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAV3A0A0B4J244 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAV3A0A0B4J244 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TRAV3A0A0B4J244 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV3A0A0B4J244 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.68■□□□□ 0.26
TRAV3A0A0B4J244 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV3A0A0B4J244 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV3A0A0B4J244 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV3A0A0B4J244 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV3A0A0B4J244 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.67■□□□□ 0.26
TRAV3A0A0B4J244 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.67■□□□□ 0.26
TRAV3A0A0B4J244 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.67■□□□□ 0.26
TRAV3A0A0B4J244 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV3A0A0B4J244 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV3A0A0B4J244 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.67■□□□□ 0.26
TRAV3A0A0B4J244 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.67■□□□□ 0.26
TRAV3A0A0B4J244 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC16.67■□□□□ 0.26
TRAV3A0A0B4J244 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC16.67■□□□□ 0.26
TRAV3A0A0B4J244 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.67■□□□□ 0.26
TRAV3A0A0B4J244 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV3A0A0B4J244 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC16.67■□□□□ 0.26
TRAV3A0A0B4J244 MIR6084-201ENST00000622012 110 ntBASIC16.67■□□□□ 0.26
TRAV3A0A0B4J244 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV3A0A0B4J244 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV3A0A0B4J244 FP700111.2-201ENST00000619190 1892 ntBASIC16.67■□□□□ 0.26
TRAV3A0A0B4J244 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TRAV3A0A0B4J244 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAV3A0A0B4J244 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAV3A0A0B4J244 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
TRAV3A0A0B4J244 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAV3A0A0B4J244 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV3A0A0B4J244 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV3A0A0B4J244 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV3A0A0B4J244 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TRAV3A0A0B4J244 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV3A0A0B4J244 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC16.66■□□□□ 0.26
TRAV3A0A0B4J244 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV3A0A0B4J244 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAV3A0A0B4J244 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TRAV3A0A0B4J244 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.66■□□□□ 0.26
TRAV3A0A0B4J244 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAV3A0A0B4J244 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TRAV3A0A0B4J244 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV3A0A0B4J244 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV3A0A0B4J244 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV3A0A0B4J244 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.65■□□□□ 0.26
TRAV3A0A0B4J244 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV3A0A0B4J244 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRAV3A0A0B4J244 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV3A0A0B4J244 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAV3A0A0B4J244 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV3A0A0B4J244 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV3A0A0B4J244 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV3A0A0B4J244 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
TRAV3A0A0B4J244 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV3A0A0B4J244 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV3A0A0B4J244 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.65■□□□□ 0.26
TRAV3A0A0B4J244 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAV3A0A0B4J244 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV3A0A0B4J244 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRAV3A0A0B4J244 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TRAV3A0A0B4J244 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV3A0A0B4J244 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAV3A0A0B4J244 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV3A0A0B4J244 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV3A0A0B4J244 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
TRAV3A0A0B4J244 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV3A0A0B4J244 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV3A0A0B4J244 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRAV3A0A0B4J244 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV3A0A0B4J244 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAV3A0A0B4J244 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAV3A0A0B4J244 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRAV3A0A0B4J244 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.64■□□□□ 0.26
TRAV3A0A0B4J244 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRAV3A0A0B4J244 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV3A0A0B4J244 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV3A0A0B4J244 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms