Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.48■□□□□ 0.71
TRBV5-3A0A0A0MS03 TPRG1LP1-201ENST00000598702 760 ntBASIC19.48■□□□□ 0.71
TRBV5-3A0A0A0MS03 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TRBV5-3A0A0A0MS03 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV5-3A0A0A0MS03 AC099778.1-201ENST00000568593 1911 ntBASIC19.48■□□□□ 0.71
TRBV5-3A0A0A0MS03 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.48■□□□□ 0.71
TRBV5-3A0A0A0MS03 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV5-3A0A0A0MS03 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
TRBV5-3A0A0A0MS03 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV5-3A0A0A0MS03 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.48■□□□□ 0.71
TRBV5-3A0A0A0MS03 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TRBV5-3A0A0A0MS03 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV5-3A0A0A0MS03 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TRBV5-3A0A0A0MS03 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TRBV5-3A0A0A0MS03 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV5-3A0A0A0MS03 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.47■□□□□ 0.71
TRBV5-3A0A0A0MS03 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV5-3A0A0A0MS03 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV5-3A0A0A0MS03 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV5-3A0A0A0MS03 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.47■□□□□ 0.71
TRBV5-3A0A0A0MS03 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV5-3A0A0A0MS03 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
TRBV5-3A0A0A0MS03 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV5-3A0A0A0MS03 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.47■□□□□ 0.71
TRBV5-3A0A0A0MS03 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV5-3A0A0A0MS03 AC106739.1-201ENST00000617035 715 ntBASIC19.47■□□□□ 0.71
TRBV5-3A0A0A0MS03 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.47■□□□□ 0.71
TRBV5-3A0A0A0MS03 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV5-3A0A0A0MS03 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV5-3A0A0A0MS03 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TRBV5-3A0A0A0MS03 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV5-3A0A0A0MS03 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
TRBV5-3A0A0A0MS03 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV5-3A0A0A0MS03 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TRBV5-3A0A0A0MS03 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV5-3A0A0A0MS03 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
TRBV5-3A0A0A0MS03 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
TRBV5-3A0A0A0MS03 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TRBV5-3A0A0A0MS03 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.46■□□□□ 0.71
TRBV5-3A0A0A0MS03 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.46■□□□□ 0.71
TRBV5-3A0A0A0MS03 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV5-3A0A0A0MS03 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV5-3A0A0A0MS03 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV5-3A0A0A0MS03 EDA-201ENST00000338901 1233 ntBASIC19.46■□□□□ 0.71
TRBV5-3A0A0A0MS03 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.46■□□□□ 0.71
TRBV5-3A0A0A0MS03 MIR939-201ENST00000401314 82 ntBASIC19.46■□□□□ 0.71
TRBV5-3A0A0A0MS03 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.46■□□□□ 0.71
TRBV5-3A0A0A0MS03 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.46■□□□□ 0.71
TRBV5-3A0A0A0MS03 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV5-3A0A0A0MS03 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.46■□□□□ 0.71
TRBV5-3A0A0A0MS03 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.46■□□□□ 0.71
TRBV5-3A0A0A0MS03 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TRBV5-3A0A0A0MS03 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV5-3A0A0A0MS03 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV5-3A0A0A0MS03 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV5-3A0A0A0MS03 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.46■□□□□ 0.71
TRBV5-3A0A0A0MS03 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV5-3A0A0A0MS03 RASA4CP-201ENST00000424092 1398 ntBASIC19.45■□□□□ 0.7
TRBV5-3A0A0A0MS03 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV5-3A0A0A0MS03 AC096631.2-201ENST00000436136 790 ntBASIC19.45■□□□□ 0.7
TRBV5-3A0A0A0MS03 PBX2P1-201ENST00000493219 1291 ntBASIC19.45■□□□□ 0.7
TRBV5-3A0A0A0MS03 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.45■□□□□ 0.7
TRBV5-3A0A0A0MS03 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV5-3A0A0A0MS03 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV5-3A0A0A0MS03 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV5-3A0A0A0MS03 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV5-3A0A0A0MS03 AC112907.3-201ENST00000577781 2400 ntBASIC19.45■□□□□ 0.7
TRBV5-3A0A0A0MS03 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.45■□□□□ 0.7
TRBV5-3A0A0A0MS03 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.45■□□□□ 0.7
TRBV5-3A0A0A0MS03 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TRBV5-3A0A0A0MS03 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV5-3A0A0A0MS03 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV5-3A0A0A0MS03 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV5-3A0A0A0MS03 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TRBV5-3A0A0A0MS03 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV5-3A0A0A0MS03 PCDHAC2-203ENST00000615316 3011 ntBASIC19.44■□□□□ 0.7
TRBV5-3A0A0A0MS03 PKD1P6-201ENST00000343738 4769 ntBASIC19.44■□□□□ 0.7
TRBV5-3A0A0A0MS03 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.44■□□□□ 0.7
TRBV5-3A0A0A0MS03 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.44■□□□□ 0.7
TRBV5-3A0A0A0MS03 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.44■□□□□ 0.7
TRBV5-3A0A0A0MS03 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV5-3A0A0A0MS03 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV5-3A0A0A0MS03 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV5-3A0A0A0MS03 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.44■□□□□ 0.7
TRBV5-3A0A0A0MS03 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV5-3A0A0A0MS03 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV5-3A0A0A0MS03 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV5-3A0A0A0MS03 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.44■□□□□ 0.7
TRBV5-3A0A0A0MS03 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV5-3A0A0A0MS03 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV5-3A0A0A0MS03 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.43■□□□□ 0.7
TRBV5-3A0A0A0MS03 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV5-3A0A0A0MS03 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.43■□□□□ 0.7
TRBV5-3A0A0A0MS03 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.43■□□□□ 0.7
TRBV5-3A0A0A0MS03 AL031432.3-201ENST00000607698 485 ntBASIC19.43■□□□□ 0.7
TRBV5-3A0A0A0MS03 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.43■□□□□ 0.7
TRBV5-3A0A0A0MS03 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.43■□□□□ 0.7
TRBV5-3A0A0A0MS03 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.43■□□□□ 0.7
TRBV5-3A0A0A0MS03 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.43■□□□□ 0.7
TRBV5-3A0A0A0MS03 AC007952.6-201ENST00000573168 2673 ntBASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms