Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV27A0A087WT01 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV27A0A087WT01 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
TRAV27A0A087WT01 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TRAV27A0A087WT01 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.78■□□□□ 0.6
TRAV27A0A087WT01 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV27A0A087WT01 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.78■□□□□ 0.6
TRAV27A0A087WT01 AL358852.1-201ENST00000623174 1268 ntBASIC18.78■□□□□ 0.6
TRAV27A0A087WT01 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV27A0A087WT01 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV27A0A087WT01 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV27A0A087WT01 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV27A0A087WT01 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.78■□□□□ 0.6
TRAV27A0A087WT01 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.78■□□□□ 0.6
TRAV27A0A087WT01 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV27A0A087WT01 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV27A0A087WT01 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV27A0A087WT01 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV27A0A087WT01 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV27A0A087WT01 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV27A0A087WT01 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV27A0A087WT01 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV27A0A087WT01 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV27A0A087WT01 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV27A0A087WT01 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV27A0A087WT01 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV27A0A087WT01 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV27A0A087WT01 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV27A0A087WT01 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV27A0A087WT01 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.77■□□□□ 0.6
TRAV27A0A087WT01 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV27A0A087WT01 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV27A0A087WT01 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
TRAV27A0A087WT01 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV27A0A087WT01 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.77■□□□□ 0.6
TRAV27A0A087WT01 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TRAV27A0A087WT01 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
TRAV27A0A087WT01 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV27A0A087WT01 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TRAV27A0A087WT01 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TRAV27A0A087WT01 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV27A0A087WT01 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
TRAV27A0A087WT01 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV27A0A087WT01 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV27A0A087WT01 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV27A0A087WT01 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TRAV27A0A087WT01 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TRAV27A0A087WT01 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.76■□□□□ 0.59
TRAV27A0A087WT01 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
TRAV27A0A087WT01 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.76■□□□□ 0.59
TRAV27A0A087WT01 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.76■□□□□ 0.59
TRAV27A0A087WT01 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.76■□□□□ 0.59
TRAV27A0A087WT01 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.76■□□□□ 0.59
TRAV27A0A087WT01 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TRAV27A0A087WT01 AP004607.4-201ENST00000530158 1459 ntBASIC18.76■□□□□ 0.59
TRAV27A0A087WT01 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV27A0A087WT01 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV27A0A087WT01 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TRAV27A0A087WT01 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV27A0A087WT01 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV27A0A087WT01 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TRAV27A0A087WT01 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV27A0A087WT01 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV27A0A087WT01 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TRAV27A0A087WT01 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV27A0A087WT01 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.75■□□□□ 0.59
TRAV27A0A087WT01 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
TRAV27A0A087WT01 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV27A0A087WT01 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV27A0A087WT01 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
TRAV27A0A087WT01 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV27A0A087WT01 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV27A0A087WT01 GABARAPL3-202ENST00000624044 1851 ntBASIC18.75■□□□□ 0.59
TRAV27A0A087WT01 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV27A0A087WT01 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.75■□□□□ 0.59
TRAV27A0A087WT01 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
TRAV27A0A087WT01 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV27A0A087WT01 AC007225.1-201ENST00000566331 1836 ntBASIC18.74■□□□□ 0.59
TRAV27A0A087WT01 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.74■□□□□ 0.59
TRAV27A0A087WT01 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV27A0A087WT01 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV27A0A087WT01 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TRAV27A0A087WT01 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV27A0A087WT01 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV27A0A087WT01 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TRAV27A0A087WT01 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV27A0A087WT01 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV27A0A087WT01 AC079140.4-201ENST00000507448 529 ntBASIC18.74■□□□□ 0.59
TRAV27A0A087WT01 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV27A0A087WT01 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV27A0A087WT01 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.74■□□□□ 0.59
TRAV27A0A087WT01 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV27A0A087WT01 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV27A0A087WT01 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.74■□□□□ 0.59
TRAV27A0A087WT01 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TRAV27A0A087WT01 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TRAV27A0A087WT01 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV27A0A087WT01 AC027702.1-201ENST00000563810 1770 ntBASIC18.73■□□□□ 0.59
TRAV27A0A087WT01 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.73■□□□□ 0.59
TRAV27A0A087WT01 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms