Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC004858.1-201ENST00000554078 242 ntBASIC10.4□□□□□ -0.74
LMO3Q8TAP4 TRAV33-201ENST00000557514 338 ntBASIC10.4□□□□□ -0.74
LMO3Q8TAP4 AC104984.4-201ENST00000577420 224 ntTSL 3 BASIC10.4□□□□□ -0.74
LMO3Q8TAP4 RN7SL45P-201ENST00000578050 298 ntBASIC10.4□□□□□ -0.74
LMO3Q8TAP4 ZNF283-208ENST00000593268 552 ntTSL 5 BASIC10.4□□□□□ -0.74
LMO3Q8TAP4 LINC01440-203ENST00000596828 1005 ntTSL 5 BASIC10.4□□□□□ -0.74
LMO3Q8TAP4 AC008753.2-201ENST00000597420 387 ntBASIC10.4□□□□□ -0.74
LMO3Q8TAP4 AC022400.4-201ENST00000604613 286 ntBASIC10.4□□□□□ -0.74
LMO3Q8TAP4 AC005696.3-201ENST00000608984 303 ntTSL 3 BASIC10.4□□□□□ -0.74
LMO3Q8TAP4 AC139768.1-201ENST00000620274 898 ntBASIC10.4□□□□□ -0.74
LMO3Q8TAP4 AC132825.5-201ENST00000640603 310 ntBASIC10.4□□□□□ -0.74
LMO3Q8TAP4 BACH2-210ENST00000537989 9108 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LMO3Q8TAP4 NSMAF-201ENST00000038176 3569 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LMO3Q8TAP4 SLC12A5-205ENST00000454036 3593 ntTSL 5 BASIC10.4□□□□□ -0.74
LMO3Q8TAP4 SEZ6L-205ENST00000403121 3078 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LMO3Q8TAP4 PC-203ENST00000393960 4192 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
LMO3Q8TAP4 DOCK4-204ENST00000428084 7997 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
LMO3Q8TAP4 BTN2A3P-204ENST00000466808 2559 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LMO3Q8TAP4 SLC26A9-203ENST00000367135 4799 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LMO3Q8TAP4 NRP1-206ENST00000374867 5877 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LMO3Q8TAP4 KIAA0141-202ENST00000432126 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
LMO3Q8TAP4 PDZK1-205ENST00000451928 1897 ntTSL 2 BASIC10.4□□□□□ -0.75
LMO3Q8TAP4 LINC02452-201ENST00000637833 2982 ntTSL 5 BASIC10.4□□□□□ -0.75
LMO3Q8TAP4 TRPV1-202ENST00000399756 4068 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
LMO3Q8TAP4 TFB1M-201ENST00000367166 1424 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
LMO3Q8TAP4 LINC00339-210ENST00000635675 1404 ntTSL 5 BASIC10.4□□□□□ -0.75
LMO3Q8TAP4 CES5A-203ENST00000518005 2092 ntTSL 2 BASIC10.4□□□□□ -0.75
LMO3Q8TAP4 CCR1-201ENST00000296140 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
LMO3Q8TAP4 ZSCAN9-201ENST00000252207 1621 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
LMO3Q8TAP4 MPI-201ENST00000323744 1619 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
LMO3Q8TAP4 BCL6-202ENST00000406870 3569 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
LMO3Q8TAP4 AC007608.1-201ENST00000379963 2469 ntTSL 2 BASIC10.4□□□□□ -0.75
LMO3Q8TAP4 IGF1R-201ENST00000268035 11803 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
LMO3Q8TAP4 HSBP1-201ENST00000433866 8784 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 RAB29-202ENST00000367139 3272 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 JAM2-206ENST00000480456 4337 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 STPG1-203ENST00000374409 2804 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 FAM71C-201ENST00000324341 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 KRBA2-201ENST00000331336 1964 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 KIF26B-201ENST00000366518 12113 ntTSL 5 BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 C9orf131-202ENST00000354479 3184 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 FN1-205ENST00000357867 7898 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 ACMSD-201ENST00000356140 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 UNC119-205ENST00000484980 4189 ntTSL 2 BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 PRPF40A-202ENST00000410080 8048 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 LARP1B-210ENST00000512292 3105 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 CRISPLD1-201ENST00000262207 4287 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 WDR55-201ENST00000358337 4080 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 TPT1-214ENST00000616577 4814 ntTSL 3 BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 CCT7P2-201ENST00000479109 1454 ntBASIC10.39□□□□□ -0.75
LMO3Q8TAP4 SPINT3-201ENST00000217428 476 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 SIRPG-203ENST00000344103 1042 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 H2AFV-203ENST00000349299 596 ntTSL 2 BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 CTNNBL1-202ENST00000373469 1130 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 APOM-201ENST00000375916 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 APOM-203ENST00000375920 709 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 MLANA-201ENST00000381471 1000 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 U3.16-201ENST00000384391 209 ntBASIC10.39□□□□□ -0.75
LMO3Q8TAP4 TPM3P1-201ENST00000413233 747 ntBASIC10.39□□□□□ -0.75
LMO3Q8TAP4 IFIT6P-201ENST00000418257 1194 ntBASIC10.39□□□□□ -0.75
LMO3Q8TAP4 NINJ2-203ENST00000433832 945 ntTSL 2 BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 AP000561.1-201ENST00000444130 435 ntTSL 5 BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 AC012558.1-201ENST00000451946 622 ntTSL 3 BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 ENTPD1-AS1-209ENST00000452728 858 ntTSL 3 BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 CEACAM22P-203ENST00000455455 545 ntTSL 4 BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 RN7SL344P-201ENST00000485522 296 ntBASIC10.39□□□□□ -0.75
LMO3Q8TAP4 SNRPCP16-201ENST00000506029 210 ntBASIC10.39□□□□□ -0.75
LMO3Q8TAP4 AC137810.1-201ENST00000510433 540 ntTSL 4 BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 AC084116.1-201ENST00000521428 489 ntTSL 3 BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 AC090099.2-201ENST00000529793 681 ntBASIC10.39□□□□□ -0.75
LMO3Q8TAP4 AC002070.1-201ENST00000537366 693 ntTSL 3 BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 AC012150.1-201ENST00000553075 593 ntTSL 4 BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 AC093330.1-204ENST00000582763 396 ntTSL 5 BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 AC073254.1-210ENST00000597495 635 ntTSL 5 BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 NDUFA6-AS1-208ENST00000600968 662 ntTSL 5 BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 AC135048.3-201ENST00000614997 328 ntBASIC10.39□□□□□ -0.75
LMO3Q8TAP4 AC019322.3-201ENST00000616104 478 ntBASIC10.39□□□□□ -0.75
LMO3Q8TAP4 AC022784.8-201ENST00000623764 559 ntBASIC10.39□□□□□ -0.75
LMO3Q8TAP4 CSMD2-203ENST00000373377 3212 ntTSL 2 BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 TRPV1-207ENST00000572705 4166 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 FLII-215ENST00000545457 3975 ntTSL 2 BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 EPHA5-206ENST00000622150 8421 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 FAM13A-212ENST00000508369 3169 ntTSL 5 BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 PYGB-201ENST00000216962 4134 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 SLC25A53-202ENST00000594199 6225 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 ZNF30-201ENST00000303586 2579 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 AL512625.3-201ENST00000586625 1440 ntTSL 3 BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 VWA5A-204ENST00000449321 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 TTC3-202ENST00000355666 7712 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 PREPL-202ENST00000378511 2315 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 THSD4-203ENST00000357769 3403 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 DDR1-AS1-206ENST00000458361 3994 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 IL5RA-210ENST00000456302 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LMO3Q8TAP4 AC090525.2-201ENST00000551685 2270 ntBASIC10.38□□□□□ -0.75
LMO3Q8TAP4 GRIK3-201ENST00000373091 9101 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LMO3Q8TAP4 PLEKHA8P1-202ENST00000336399 1524 ntBASIC10.38□□□□□ -0.75
LMO3Q8TAP4 GPLD1-201ENST00000230036 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LMO3Q8TAP4 NCOA4-207ENST00000585132 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LMO3Q8TAP4 LIMCH1-208ENST00000508501 5054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LMO3Q8TAP4 LIMCH1-217ENST00000512946 5057 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms