Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 AP001357.2-201ENST00000586758 710 ntBASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 ZNF527-204ENST00000587349 999 ntTSL 3 BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 PSMG2-210ENST00000590217 1036 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 AC016747.3-201ENST00000609422 791 ntBASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 LINC01727-202ENST00000623256 1218 ntTSL 4 BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 SOX2-OT-249ENST00000628810 618 ntTSL 5 BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 EIF3C-202ENST00000395587 3137 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 KCNE1-209ENST00000621601 3148 ntAPPRIS P1 TSL 4 BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 BCL2L13-216ENST00000616863 4761 ntTSL 4 BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 PCDHAC1-202ENST00000409700 4077 ntAPPRIS ALT2 BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 BTD-206ENST00000437172 2097 ntTSL 2 BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 CYTH4-201ENST00000248901 3206 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 SIPA1L2-203ENST00000366630 6690 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 GLT1D1-205ENST00000537468 1714 ntTSL 2 BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 NRF1-204ENST00000393230 3523 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 CASP3-206ENST00000523916 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 RELA-205ENST00000525693 3183 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 ZNF776-201ENST00000317178 5292 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 RFX2-201ENST00000303657 3993 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 TP63-211ENST00000449992 1506 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 FCGR2C-211ENST00000543859 1507 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 CASC19-230ENST00000641421 1530 ntBASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 USP54-204ENST00000422491 2777 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 KIRREL1-203ENST00000368172 6870 ntTSL 2 BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 NAIP-201ENST00000194097 6088 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 ARHGEF9-202ENST00000374870 4644 ntTSL 5 BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 RPE-202ENST00000359429 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 CD44-201ENST00000263398 4589 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 XKR9-201ENST00000408926 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 PGR-207ENST00000534013 1901 ntTSL 2 BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 MUC6-201ENST00000421673 8006 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 HIST1H3E-202ENST00000634733 2679 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 SCML1-202ENST00000380043 2830 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 PAX6-235ENST00000638629 2844 ntTSL 2 BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 ATP2C1-204ENST00000428331 4795 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 TRPM1-201ENST00000256552 5514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 RBP2-201ENST00000232217 694 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 HSD17B7-201ENST00000254521 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 OR4K2-201ENST00000298642 1078 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 CSHL1-202ENST00000309894 669 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 NECAP1P1-201ENST00000320802 830 ntBASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 TAGAP-201ENST00000326965 3051 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 SLPI-201ENST00000338380 596 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 ANXA10-201ENST00000359299 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 KRTAP20-3-201ENST00000382826 273 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 PAQR5-202ENST00000395407 5337 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 HP-204ENST00000398131 1252 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 RN7SKP94-201ENST00000411044 284 ntBASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 AC004129.1-201ENST00000417617 796 ntBASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 SEMA3B-AS1-201ENST00000421735 338 ntTSL 2 BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 SUFU-203ENST00000423559 2601 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 AC245036.3-201ENST00000429259 146 ntBASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 AC073626.2-201ENST00000449443 316 ntBASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 AL360268.1-201ENST00000453870 765 ntTSL 3 BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 AC020743.1-201ENST00000454877 767 ntTSL 3 BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 AC010907.2-201ENST00000456450 693 ntTSL 3 BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 PDPN-204ENST00000475043 849 ntTSL 3 BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 SERPINB5-205ENST00000489441 1268 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 AC011487.1-201ENST00000509280 887 ntBASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 RPL10P19-203ENST00000522289 663 ntTSL 3 BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 AC128707.1-202ENST00000548963 693 ntTSL 5 BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 LINC01405-204ENST00000553177 524 ntTSL 4 BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 AC068152.1-202ENST00000571901 808 ntTSL 3 BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 AC136469.1-201ENST00000595706 511 ntTSL 5 BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 ZNF546-204ENST00000596894 714 ntTSL 3 BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 ZNF678-205ENST00000608949 929 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 DACH2-208ENST00000613770 1731 ntTSL 5 BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 uc_338.23-201ENST00000614169 164 ntBASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 CDHR2-201ENST00000261944 4068 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 HNRNPDL-201ENST00000295470 3781 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 NCAM1-201ENST00000316851 5837 ntTSL 5 BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 ARID1B-210ENST00000635849 5830 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 FNBP1-204ENST00000446176 5393 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 AL049775.1-201ENST00000380722 2448 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 THAP12P2-201ENST00000489193 2267 ntBASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 AL031666.2-201ENST00000599904 2253 ntBASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 NOD2-201ENST00000300589 4486 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 GOLGA6B-201ENST00000421285 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 GALK2-202ENST00000396509 1834 ntTSL 2 BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 LPA-202ENST00000447678 1839 ntTSL 5 BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 C1RL-AS1-205ENST00000541775 5272 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 ZAN-205ENST00000613979 8669 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 CLIP1-209ENST00000537178 5229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 TCF20-201ENST00000335626 6237 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 AL022476.1-201ENST00000443063 2083 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 SIGLEC8-201ENST00000321424 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 NWD1-204ENST00000524140 7641 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 REV3L-202ENST00000368802 10701 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCE2Q6PIF2 MARF1-205ENST00000548025 5891 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 TMEM184C-201ENST00000296582 4178 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 ZNF141-205ENST00000512994 1611 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 CCNK-204ENST00000555049 1606 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 FCHO2-202ENST00000430046 4981 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 OTUD7B-202ENST00000581312 8872 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 AC009055.2-201ENST00000567058 1337 ntTSL 5 BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 PRRG1-209ENST00000543642 4509 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 BAGE2-203ENST00000496773 2598 ntBASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 ALS2-206ENST00000467448 2677 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 SERPINC1-201ENST00000367698 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 MROH7-201ENST00000339553 3459 ntTSL 5 BASIC10.36□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms