Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC009127.2-201ENST00000561979 426 ntTSL 5 BASIC9.13□□□□□ -0.95
P04436 AC135048.2-201ENST00000572471 561 ntTSL 4 BASIC9.13□□□□□ -0.95
P04436 AC087392.2-201ENST00000573877 585 ntTSL 2 BASIC9.13□□□□□ -0.95
P04436 SPCS1-205ENST00000602728 832 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
P04436 FAM229B-202ENST00000604268 598 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
P04436 AL138995.1-201ENST00000614633 675 ntBASIC9.13□□□□□ -0.95
P04436 AC135048.3-201ENST00000614997 328 ntBASIC9.13□□□□□ -0.95
P04436 AC005703.5-201ENST00000623654 555 ntBASIC9.13□□□□□ -0.95
P04436 AC233300.1-201ENST00000624323 817 ntBASIC9.13□□□□□ -0.95
P04436 GALNTL5-211ENST00000616416 1763 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
P04436 CHORDC1-202ENST00000457199 2003 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
P04436 KIF13B-201ENST00000521515 2765 ntTSL 5 BASIC9.13□□□□□ -0.95
P04436 USP6NL-202ENST00000379237 4546 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
P04436 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
P04436 PHF19-214ENST00000616568 4159 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
P04436 SIAE-205ENST00000545756 2921 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
P04436 AC034229.3-201ENST00000606203 2436 ntBASIC9.13□□□□□ -0.95
P04436 AKAP12-202ENST00000354675 6287 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
P04436 OMA1-201ENST00000371226 1935 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
P04436 SNX20-201ENST00000300590 3304 ntTSL 2 BASIC9.13□□□□□ -0.95
P04436 FAM111B-204ENST00000529618 2364 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
P04436 CYP2B6-201ENST00000324071 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
P04436 AL157815.1-201ENST00000635484 2117 ntBASIC9.13□□□□□ -0.95
P04436 MTOR-201ENST00000361445 8677 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
P04436 HIVEP2-201ENST00000012134 9755 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
P04436 ZDHHC11B-202ENST00000508859 1631 ntAPPRIS P5 TSL 5 BASIC9.13□□□□□ -0.95
P04436 SLC6A15-201ENST00000266682 4879 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
P04436 CD22-202ENST00000341773 2755 ntTSL 5 BASIC9.12□□□□□ -0.95
P04436 ZNF814-213ENST00000597832 2090 ntTSL 2 BASIC9.12□□□□□ -0.95
P04436 SRGAP2-AS1-202ENST00000437515 2504 ntTSL 2 BASIC9.12□□□□□ -0.95
P04436 MRPL47-203ENST00000476781 1370 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
P04436 SERPINE1-201ENST00000223095 3190 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
P04436 RNF31-211ENST00000559275 3198 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
P04436 SLC14A1-203ENST00000415427 1554 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
P04436 AL109615.3-201ENST00000422059 2232 ntTSL 2 BASIC9.12□□□□□ -0.95
P04436 HVCN1-207ENST00000548312 1301 ntTSL 2 BASIC9.12□□□□□ -0.95
P04436 AC005921.3-201ENST00000623774 2151 ntBASIC9.12□□□□□ -0.95
P04436 ABLIM1-204ENST00000369256 3203 ntTSL 5 BASIC9.12□□□□□ -0.95
P04436 XIAP-201ENST00000355640 8584 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
P04436 AMOTL1-203ENST00000433060 8970 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
P04436 OR1N1-201ENST00000304880 936 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
P04436 PDZD11-202ENST00000374454 784 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
P04436 ARL4A-202ENST00000396662 1296 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
P04436 GZMB-204ENST00000415355 923 ntTSL 2 BASIC9.12□□□□□ -0.95
P04436 AL035411.1-201ENST00000427762 690 ntBASIC9.12□□□□□ -0.95
P04436 AL445072.1-201ENST00000438994 639 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
P04436 AC026477.1-201ENST00000439391 616 ntBASIC9.12□□□□□ -0.95
P04436 HNRNPA3P14-201ENST00000444546 1150 ntBASIC9.12□□□□□ -0.95
P04436 AL357079.1-202ENST00000445226 294 ntTSL 3 BASIC9.12□□□□□ -0.95
P04436 C11orf98P1-201ENST00000446114 318 ntBASIC9.12□□□□□ -0.95
P04436 HSFX4-201ENST00000457775 1184 ntAPPRIS P1 TSL 3 BASIC9.12□□□□□ -0.95
P04436 AL132838.1-201ENST00000469219 542 ntBASIC9.12□□□□□ -0.95
P04436 AC055748.1-201ENST00000489836 959 ntBASIC9.12□□□□□ -0.95
P04436 AC003029.1-201ENST00000493495 603 ntBASIC9.12□□□□□ -0.95
P04436 AP002784.1-201ENST00000506309 546 ntTSL 4 BASIC9.12□□□□□ -0.95
P04436 TMEM92-202ENST00000507382 573 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
P04436 AC022784.6-205ENST00000518619 807 ntTSL 3 BASIC9.12□□□□□ -0.95
P04436 PLBD1-AS1-201ENST00000542401 539 ntTSL 4 BASIC9.12□□□□□ -0.95
P04436 AC109631.1-201ENST00000559695 781 ntBASIC9.12□□□□□ -0.95
P04436 AC010186.4-201ENST00000573622 615 ntTSL 3 BASIC9.12□□□□□ -0.95
P04436 HNRNPA1P52-201ENST00000599047 947 ntBASIC9.12□□□□□ -0.95
P04436 BNIP3P36-201ENST00000603076 574 ntBASIC9.12□□□□□ -0.95
P04436 AL161911.2-201ENST00000603920 371 ntBASIC9.12□□□□□ -0.95
P04436 VDAC3P1-201ENST00000604654 850 ntBASIC9.12□□□□□ -0.95
P04436 MIR6776-201ENST00000616678 59 ntBASIC9.12□□□□□ -0.95
P04436 AL158077.1-201ENST00000616744 174 ntBASIC9.12□□□□□ -0.95
P04436 Metazoa_SRP.205-201ENST00000620071 267 ntBASIC9.12□□□□□ -0.95
P04436 AC015978.1-201ENST00000635343 890 ntBASIC9.12□□□□□ -0.95
P04436 AL117339.1-203ENST00000638066 888 ntBASIC9.12□□□□□ -0.95
P04436 OLMALINC-205ENST00000641708 1184 ntBASIC9.12□□□□□ -0.95
P04436 DSC3-202ENST00000434452 6978 ntTSL 5 BASIC9.12□□□□□ -0.95
P04436 CAB39L-201ENST00000347776 3361 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
P04436 E2F3-202ENST00000535432 4425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
P04436 COL4A6-201ENST00000334504 6700 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
P04436 AC020904.2-201ENST00000621646 1669 ntTSL 3 BASIC9.12□□□□□ -0.95
P04436 DNAJC17-201ENST00000220496 3731 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
P04436 AC079193.2-201ENST00000513892 2292 ntTSL 2 BASIC9.12□□□□□ -0.95
P04436 DPF2-201ENST00000252268 2462 ntTSL 5 BASIC9.12□□□□□ -0.95
P04436 CACNA1S-202ENST00000367338 5996 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
P04436 FAM172A-201ENST00000395965 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
P04436 UQCC1-205ENST00000374385 2447 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
P04436 AC083902.2-201ENST00000511828 10086 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
P04436 MYT1L-203ENST00000407844 3642 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
P04436 PLA2G4D-201ENST00000290472 3584 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
P04436 ZNF397-203ENST00000355632 2162 ntTSL 5 BASIC9.12□□□□□ -0.95
P04436 EMP1-201ENST00000256951 5921 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
P04436 CD36-208ENST00000433696 1985 ntTSL 5 BASIC9.12□□□□□ -0.95
P04436 ZNF266-202ENST00000588221 3503 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
P04436 CD274-201ENST00000381573 3343 ntTSL 5 BASIC9.11□□□□□ -0.95
P04436 RAPGEF6-209ENST00000510071 3107 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
P04436 RBFOX1-202ENST00000340209 4099 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
P04436 DCTN1-AS1-206ENST00000437991 2145 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
P04436 VNN3-204ENST00000414302 1312 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
P04436 SPOCD1-214ENST00000533231 3774 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
P04436 PPT1-209ENST00000530076 1872 ntTSL 2 BASIC9.11□□□□□ -0.95
P04436 CEP112-203ENST00000535342 3392 ntAPPRIS P4 TSL 2 BASIC9.11□□□□□ -0.95
P04436 AL353795.3-201ENST00000624351 5702 ntBASIC9.11□□□□□ -0.95
P04436 HLTF-202ENST00000392912 3896 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
P04436 TTTY11-201ENST00000253470 837 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
P04436 IL6-201ENST00000258743 1182 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 146.5 ms