RNA–Protein interactions for RNA: ENST00000256951.9

EMP1-201, Transcript of epithelial membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EMP1, Length 5,921 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMP1-201ENST00000256951 NISCHQ9Y2I1 1504 aa17.21■□□□□ 0.35
EMP1-201ENST00000256951 DCAF8L2P0C7V8 631 aa16.67■□□□□ 0.26
EMP1-201ENST00000256951 SUPT5HO00267 1087 aaKnown RBP16.19■□□□□ 0.18
EMP1-201ENST00000256951 SHROOM4Q9ULL8 1493 aa16■□□□□ 0.15
EMP1-201ENST00000256951 EHMT2Q96KQ7 1210 aa15.29■□□□□ 0.04
EMP1-201ENST00000256951 APLP2Q06481 763 aa15.26■□□□□ 0.03
EMP1-201ENST00000256951 PCGF6Q9BYE7 350 aa15.25■□□□□ 0.03
EMP1-201ENST00000256951 PELP1Q8IZL8 1130 aaKnown RBP15.24■□□□□ 0.03
EMP1-201ENST00000256951 ZEB1P37275 1124 aaPredicted RBP15.22■□□□□ 0.03
EMP1-201ENST00000256951 FAM9AQ8IZU1 332 aaPredicted RBP15.15■□□□□ 0.02
EMP1-201ENST00000256951 TRIM41Q8WV44 630 aa15.13■□□□□ 0.01
EMP1-201ENST00000256951 CENPBP07199 599 aaPredicted RBP14.93□□□□□ -0.02
EMP1-201ENST00000256951 CCER1Q8TC90 406 aaPredicted RBP14.9□□□□□ -0.02
EMP1-201ENST00000256951 TTBK1Q5TCY1 1321 aaPredicted RBP14.85□□□□□ -0.03
EMP1-201ENST00000256951 TRIM26Q12899 539 aaPredicted RBP14.85□□□□□ -0.03
EMP1-201ENST00000256951 CHIC1Q5VXU3 224 aa14.79□□□□□ -0.04
EMP1-201ENST00000256951 HRCP23327 699 aa14.79□□□□□ -0.04
EMP1-201ENST00000256951 UBTFP17480 764 aaKnown RBP14.79□□□□□ -0.04
EMP1-201ENST00000256951 RANGAP1P46060 587 aaPredicted RBP14.65□□□□□ -0.06
EMP1-201ENST00000256951 LOC105371045A0A1W2PR82 267 aa14.55□□□□□ -0.08
EMP1-201ENST00000256951 MYT1Q01538 1121 aa14.53□□□□□ -0.08
EMP1-201ENST00000256951 ATP1B4Q9UN42 357 aaPredicted RBP14.52□□□□□ -0.08
EMP1-201ENST00000256951 PPARGC1BQ86YN6 1023 aaKnown RBP14.47□□□□□ -0.09
EMP1-201ENST00000256951 NEFLP07196 543 aa14.45□□□□□ -0.1
EMP1-201ENST00000256951 ERICH6Q7L0X2 663 aa14.45□□□□□ -0.1
EMP1-201ENST00000256951 YTHDC1Q96MU7 727 aaKnown RBP14.41□□□□□ -0.1
EMP1-201ENST00000256951 ZCCHC6Q5VYS8 1495 aaKnown RBP14.36□□□□□ -0.11
EMP1-201ENST00000256951 CCDC180Q9P1Z9 1646 aa14.29□□□□□ -0.12
EMP1-201ENST00000256951 ABCC9O60706 1549 aa14.26□□□□□ -0.13
EMP1-201ENST00000256951 HNRNPUL2Q1KMD3 747 aaKnown RBP14.25□□□□□ -0.13
EMP1-201ENST00000256951 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.19□□□□□ -0.14
EMP1-201ENST00000256951 DIEXFQ68CQ4 756 aaKnown RBP14.19□□□□□ -0.14
EMP1-201ENST00000256951 ITGAEP38570 1179 aa14.17□□□□□ -0.14
EMP1-201ENST00000256951 DCAF1Q9Y4B6 1507 aa14.15□□□□□ -0.14
EMP1-201ENST00000256951 SCRIBQ14160 1630 aa14.03□□□□□ -0.16
EMP1-201ENST00000256951 PABPN1Q86U42 306 aaKnown RBP eCLIP14.03□□□□□ -0.16
EMP1-201ENST00000256951 CSRNP3Q8WYN3 585 aa13.99□□□□□ -0.17
EMP1-201ENST00000256951 FAM50AQ14320 339 aaKnown RBP13.96□□□□□ -0.17
EMP1-201ENST00000256951 ZNF316A6NFI3 1004 aaPredicted RBP13.96□□□□□ -0.18
EMP1-201ENST00000256951 POLR3GLQ9BT43 218 aa13.9□□□□□ -0.18
EMP1-201ENST00000256951 GTF3C3Q9Y5Q9 886 aa13.87□□□□□ -0.19
EMP1-201ENST00000256951 DAXXQ9UER7 740 aaPredicted RBP13.86□□□□□ -0.19
EMP1-201ENST00000256951 ACIN1Q9UKV3 1341 aaKnown RBP13.83□□□□□ -0.2
EMP1-201ENST00000256951 ANP32CO43423 234 aa13.82□□□□□ -0.2
EMP1-201ENST00000256951 TRIM52Q96A61 297 aa13.81□□□□□ -0.2
EMP1-201ENST00000256951 NEUROD1Q13562 356 aa13.81□□□□□ -0.2
EMP1-201ENST00000256951 MYT1LQ9UL68 1186 aa13.8□□□□□ -0.2
EMP1-201ENST00000256951 CLSPNQ9HAW4 1339 aa13.78□□□□□ -0.2
EMP1-201ENST00000256951 MYO15BQ96JP2 1530 aa13.76□□□□□ -0.21
EMP1-201ENST00000256951 RSF1Q96T23 1441 aaPredicted RBP13.75□□□□□ -0.21
EMP1-201ENST00000256951 EEA1Q15075 1411 aa13.73□□□□□ -0.21
EMP1-201ENST00000256951 RB1CC1Q8TDY2 1594 aa13.73□□□□□ -0.21
EMP1-201ENST00000256951 NACADO15069 1562 aa13.71□□□□□ -0.21
EMP1-201ENST00000256951 CNGB1Q14028 1251 aaPredicted RBP13.67□□□□□ -0.22
EMP1-201ENST00000256951 RTL5Q5HYW3 569 aaPredicted RBP13.67□□□□□ -0.22
EMP1-201ENST00000256951 CDK11AQ9UQ88 783 aaPredicted RBP13.65□□□□□ -0.23
EMP1-201ENST00000256951 GOLGA3Q08378 1498 aa13.62□□□□□ -0.23
EMP1-201ENST00000256951 BCANQ96GW7 911 aa13.6□□□□□ -0.23
EMP1-201ENST00000256951 CLIP1P30622 1438 aa13.6□□□□□ -0.23
EMP1-201ENST00000256951 P3H3Q8IVL6 736 aa13.59□□□□□ -0.23
EMP1-201ENST00000256951 CEP162Q5TB80 1403 aa13.57□□□□□ -0.24
EMP1-201ENST00000256951 TONSLQ96HA7 1378 aa13.57□□□□□ -0.24
EMP1-201ENST00000256951 ZNF326Q5BKZ1 582 aaKnown RBP13.54□□□□□ -0.24
EMP1-201ENST00000256951 SLC4A1APQ9BWU0 796 aaKnown RBP13.54□□□□□ -0.24
EMP1-201ENST00000256951 TNIKQ9UKE5 1360 aa13.54□□□□□ -0.24
EMP1-201ENST00000256951 BAZ1AQ9NRL2 1556 aaPredicted RBP13.53□□□□□ -0.24
EMP1-201ENST00000256951 WRNQ14191 1432 aaPredicted RBP eCLIP13.51□□□□□ -0.25
EMP1-201ENST00000256951 CEP164Q9UPV0 1460 aa13.5□□□□□ -0.25
EMP1-201ENST00000256951 FBLN2P98095 1184 aa13.47□□□□□ -0.25
EMP1-201ENST00000256951 BAZ1BQ9UIG0 1483 aaKnown RBP13.44□□□□□ -0.26
EMP1-201ENST00000256951 FKBP8Q14318 412 aa13.41□□□□□ -0.26
EMP1-201ENST00000256951 DDX10Q13206 875 aaKnown RBP13.4□□□□□ -0.26
EMP1-201ENST00000256951 MTUS2Q5JR59 1369 aa13.4□□□□□ -0.26
EMP1-201ENST00000256951 ANP32AP39687 249 aaKnown RBP13.4□□□□□ -0.26
EMP1-201ENST00000256951 SCAF1Q9H7N4 1312 aaKnown RBP13.4□□□□□ -0.26
EMP1-201ENST00000256951 ZNF777Q9ULD5 760 aaPredicted RBP13.39□□□□□ -0.27
EMP1-201ENST00000256951 KIF27Q86VH2 1401 aa13.39□□□□□ -0.27
EMP1-201ENST00000256951 ARID3CA6NKF2 412 aa13.38□□□□□ -0.27
EMP1-201ENST00000256951 MIER1Q8N108 512 aa13.37□□□□□ -0.27
EMP1-201ENST00000256951 HNRNPUQ00839 825 aaKnown RBP eCLIP13.36□□□□□ -0.27
EMP1-201ENST00000256951 CECR2Q9BXF3 1484 aa13.35□□□□□ -0.27
EMP1-201ENST00000256951 CANXP27824 592 aaKnown RBP13.34□□□□□ -0.27
EMP1-201ENST00000256951 ZBTB47Q9UFB7 747 aaPredicted RBP13.31□□□□□ -0.28
EMP1-201ENST00000256951 NEFMP07197 916 aa13.29□□□□□ -0.28
EMP1-201ENST00000256951 MROH2BQ7Z745 1585 aa13.27□□□□□ -0.29
EMP1-201ENST00000256951 CHIC2Q9UKJ5 165 aa13.27□□□□□ -0.29
EMP1-201ENST00000256951 FAM9BQ8IZU0 186 aa13.26□□□□□ -0.29
EMP1-201ENST00000256951 EIF4G2P78344 907 aaKnown RBP eCLIP13.25□□□□□ -0.29
EMP1-201ENST00000256951 TSPY4P0CV99 314 aa13.23□□□□□ -0.29
EMP1-201ENST00000256951 TSPY10P0CW01 314 aa13.23□□□□□ -0.29
EMP1-201ENST00000256951 TMC1Q8TDI8 760 aa13.23□□□□□ -0.29
EMP1-201ENST00000256951 FHAD1B1AJZ9 1412 aa13.23□□□□□ -0.29
EMP1-201ENST00000256951 CCDC88BA6NC98 1476 aa13.22□□□□□ -0.29
EMP1-201ENST00000256951 SOGA1O94964 1423 aa13.22□□□□□ -0.29
EMP1-201ENST00000256951 MRS2Q9HD23 443 aa13.22□□□□□ -0.29
EMP1-201ENST00000256951 VPS8Q8N3P4 1428 aa13.21□□□□□ -0.29
EMP1-201ENST00000256951 TOP2AP11388 1531 aaKnown RBP13.21□□□□□ -0.3
EMP1-201ENST00000256951 CCNB3Q8WWL7 1395 aa13.19□□□□□ -0.3
EMP1-201ENST00000256951 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.18□□□□□ -0.3
EMP1-201ENST00000256951 CCDC136Q96JN2 1154 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms