Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC42Q9Y546 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.61■□□□□ 0.73
LRRC42Q9Y546 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.61■□□□□ 0.73
LRRC42Q9Y546 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC42Q9Y546 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC42Q9Y546 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC42Q9Y546 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
LRRC42Q9Y546 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC42Q9Y546 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC42Q9Y546 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC42Q9Y546 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC42Q9Y546 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
LRRC42Q9Y546 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC42Q9Y546 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
LRRC42Q9Y546 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.6■□□□□ 0.73
LRRC42Q9Y546 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
LRRC42Q9Y546 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
LRRC42Q9Y546 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC42Q9Y546 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC42Q9Y546 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC42Q9Y546 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.6■□□□□ 0.73
LRRC42Q9Y546 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
LRRC42Q9Y546 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
LRRC42Q9Y546 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC42Q9Y546 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC42Q9Y546 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.6■□□□□ 0.73
LRRC42Q9Y546 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.6■□□□□ 0.73
LRRC42Q9Y546 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC42Q9Y546 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC42Q9Y546 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC42Q9Y546 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
LRRC42Q9Y546 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.59■□□□□ 0.73
LRRC42Q9Y546 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.59■□□□□ 0.73
LRRC42Q9Y546 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC42Q9Y546 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.59■□□□□ 0.73
LRRC42Q9Y546 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.59■□□□□ 0.73
LRRC42Q9Y546 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
LRRC42Q9Y546 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC42Q9Y546 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC42Q9Y546 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC42Q9Y546 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.59■□□□□ 0.73
LRRC42Q9Y546 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.59■□□□□ 0.73
LRRC42Q9Y546 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.59■□□□□ 0.73
LRRC42Q9Y546 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC42Q9Y546 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
LRRC42Q9Y546 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
LRRC42Q9Y546 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRRC42Q9Y546 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRRC42Q9Y546 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRRC42Q9Y546 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRRC42Q9Y546 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.58■□□□□ 0.73
LRRC42Q9Y546 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRRC42Q9Y546 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRRC42Q9Y546 AC009831.1-201ENST00000580420 1582 ntBASIC19.58■□□□□ 0.73
LRRC42Q9Y546 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LRRC42Q9Y546 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRRC42Q9Y546 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC42Q9Y546 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.58■□□□□ 0.72
LRRC42Q9Y546 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.58■□□□□ 0.72
LRRC42Q9Y546 AC133552.2-201ENST00000619106 1032 ntBASIC19.58■□□□□ 0.72
LRRC42Q9Y546 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.58■□□□□ 0.72
LRRC42Q9Y546 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC42Q9Y546 LTB4R2-202ENST00000528054 3092 ntBASIC19.58■□□□□ 0.72
LRRC42Q9Y546 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC42Q9Y546 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC42Q9Y546 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
LRRC42Q9Y546 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC42Q9Y546 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC42Q9Y546 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC42Q9Y546 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC42Q9Y546 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.58■□□□□ 0.72
LRRC42Q9Y546 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC42Q9Y546 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
LRRC42Q9Y546 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.57■□□□□ 0.72
LRRC42Q9Y546 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC42Q9Y546 AP004607.7-201ENST00000527152 1677 ntBASIC19.57■□□□□ 0.72
LRRC42Q9Y546 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC42Q9Y546 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC42Q9Y546 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.57■□□□□ 0.72
LRRC42Q9Y546 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC42Q9Y546 AC079089.2-201ENST00000531211 1277 ntBASIC19.57■□□□□ 0.72
LRRC42Q9Y546 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
LRRC42Q9Y546 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC42Q9Y546 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC42Q9Y546 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC42Q9Y546 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.57■□□□□ 0.72
LRRC42Q9Y546 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC42Q9Y546 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
LRRC42Q9Y546 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
LRRC42Q9Y546 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC42Q9Y546 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC42Q9Y546 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC42Q9Y546 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC42Q9Y546 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC42Q9Y546 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.56■□□□□ 0.72
LRRC42Q9Y546 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC42Q9Y546 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC42Q9Y546 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC42Q9Y546 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC42Q9Y546 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms