Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC23.46■■□□□ 1.35
KDM3AQ9Y4C1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
KDM3AQ9Y4C1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
KDM3AQ9Y4C1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.46■■□□□ 1.35
KDM3AQ9Y4C1 CNN2P6-201ENST00000439038 900 ntBASIC23.46■■□□□ 1.35
KDM3AQ9Y4C1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.46■■□□□ 1.35
KDM3AQ9Y4C1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
KDM3AQ9Y4C1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
KDM3AQ9Y4C1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
KDM3AQ9Y4C1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.35
KDM3AQ9Y4C1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
KDM3AQ9Y4C1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
KDM3AQ9Y4C1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
KDM3AQ9Y4C1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
KDM3AQ9Y4C1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.45■■□□□ 1.34
KDM3AQ9Y4C1 SLC7A5P2-201ENST00000553010 536 ntBASIC23.45■■□□□ 1.34
KDM3AQ9Y4C1 AC010536.3-201ENST00000620306 533 ntBASIC23.45■■□□□ 1.34
KDM3AQ9Y4C1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.45■■□□□ 1.34
KDM3AQ9Y4C1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
KDM3AQ9Y4C1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
KDM3AQ9Y4C1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
KDM3AQ9Y4C1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC23.45■■□□□ 1.34
KDM3AQ9Y4C1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
KDM3AQ9Y4C1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC23.44■■□□□ 1.34
KDM3AQ9Y4C1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
KDM3AQ9Y4C1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
KDM3AQ9Y4C1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.44■■□□□ 1.34
KDM3AQ9Y4C1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
KDM3AQ9Y4C1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
KDM3AQ9Y4C1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
KDM3AQ9Y4C1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC23.44■■□□□ 1.34
KDM3AQ9Y4C1 GUSBP6-202ENST00000438529 1198 ntBASIC23.44■■□□□ 1.34
KDM3AQ9Y4C1 AC083906.2-201ENST00000511578 360 ntBASIC23.44■■□□□ 1.34
KDM3AQ9Y4C1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC23.44■■□□□ 1.34
KDM3AQ9Y4C1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC23.44■■□□□ 1.34
KDM3AQ9Y4C1 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.44■■□□□ 1.34
KDM3AQ9Y4C1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.44■■□□□ 1.34
KDM3AQ9Y4C1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC23.44■■□□□ 1.34
KDM3AQ9Y4C1 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
KDM3AQ9Y4C1 AL049796.1-201ENST00000565336 1766 ntBASIC23.43■■□□□ 1.34
KDM3AQ9Y4C1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
KDM3AQ9Y4C1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC23.43■■□□□ 1.34
KDM3AQ9Y4C1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
KDM3AQ9Y4C1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC23.43■■□□□ 1.34
KDM3AQ9Y4C1 TSPY6P-201ENST00000448518 926 ntBASIC23.43■■□□□ 1.34
KDM3AQ9Y4C1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
KDM3AQ9Y4C1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.43■■□□□ 1.34
KDM3AQ9Y4C1 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
KDM3AQ9Y4C1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC23.42■■□□□ 1.34
KDM3AQ9Y4C1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC23.42■■□□□ 1.34
KDM3AQ9Y4C1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
KDM3AQ9Y4C1 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
KDM3AQ9Y4C1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC23.42■■□□□ 1.34
KDM3AQ9Y4C1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC23.42■■□□□ 1.34
KDM3AQ9Y4C1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
KDM3AQ9Y4C1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.42■■□□□ 1.34
KDM3AQ9Y4C1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23.42■■□□□ 1.34
KDM3AQ9Y4C1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
KDM3AQ9Y4C1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
KDM3AQ9Y4C1 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
KDM3AQ9Y4C1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC23.42■■□□□ 1.34
KDM3AQ9Y4C1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
KDM3AQ9Y4C1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
KDM3AQ9Y4C1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
KDM3AQ9Y4C1 PALM-207ENST00000590161 2137 ntTSL 4 BASIC23.42■■□□□ 1.34
KDM3AQ9Y4C1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC23.42■■□□□ 1.34
KDM3AQ9Y4C1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
KDM3AQ9Y4C1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.41■■□□□ 1.34
KDM3AQ9Y4C1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
KDM3AQ9Y4C1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
KDM3AQ9Y4C1 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC23.41■■□□□ 1.34
KDM3AQ9Y4C1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.41■■□□□ 1.34
KDM3AQ9Y4C1 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
KDM3AQ9Y4C1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
KDM3AQ9Y4C1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
KDM3AQ9Y4C1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
KDM3AQ9Y4C1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
KDM3AQ9Y4C1 AF106564.1-201ENST00000607058 2553 ntBASIC23.4■■□□□ 1.34
KDM3AQ9Y4C1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
KDM3AQ9Y4C1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
KDM3AQ9Y4C1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
KDM3AQ9Y4C1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
KDM3AQ9Y4C1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
KDM3AQ9Y4C1 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
KDM3AQ9Y4C1 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
KDM3AQ9Y4C1 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC23.4■■□□□ 1.34
KDM3AQ9Y4C1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
KDM3AQ9Y4C1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.4■■□□□ 1.34
KDM3AQ9Y4C1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
KDM3AQ9Y4C1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23.4■■□□□ 1.34
KDM3AQ9Y4C1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC23.4■■□□□ 1.34
KDM3AQ9Y4C1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
KDM3AQ9Y4C1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC23.4■■□□□ 1.34
KDM3AQ9Y4C1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC23.4■■□□□ 1.34
KDM3AQ9Y4C1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.39■■□□□ 1.34
KDM3AQ9Y4C1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
KDM3AQ9Y4C1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.34
KDM3AQ9Y4C1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
KDM3AQ9Y4C1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.34
KDM3AQ9Y4C1 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.39■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms