Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.41■□□□□ 0.7
IFT52Q9Y366 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IFT52Q9Y366 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
IFT52Q9Y366 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
IFT52Q9Y366 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
IFT52Q9Y366 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IFT52Q9Y366 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
IFT52Q9Y366 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IFT52Q9Y366 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IFT52Q9Y366 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
IFT52Q9Y366 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IFT52Q9Y366 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.4■□□□□ 0.7
IFT52Q9Y366 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.4■□□□□ 0.7
IFT52Q9Y366 AL354811.1-201ENST00000610286 706 ntBASIC19.4■□□□□ 0.7
IFT52Q9Y366 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.4■□□□□ 0.7
IFT52Q9Y366 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.4■□□□□ 0.7
IFT52Q9Y366 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
IFT52Q9Y366 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
IFT52Q9Y366 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
IFT52Q9Y366 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.39■□□□□ 0.69
IFT52Q9Y366 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.39■□□□□ 0.69
IFT52Q9Y366 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
IFT52Q9Y366 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.39■□□□□ 0.69
IFT52Q9Y366 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.39■□□□□ 0.69
IFT52Q9Y366 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.39■□□□□ 0.69
IFT52Q9Y366 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.39■□□□□ 0.69
IFT52Q9Y366 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.39■□□□□ 0.69
IFT52Q9Y366 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
IFT52Q9Y366 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
IFT52Q9Y366 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
IFT52Q9Y366 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
IFT52Q9Y366 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.39■□□□□ 0.69
IFT52Q9Y366 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
IFT52Q9Y366 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
IFT52Q9Y366 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
IFT52Q9Y366 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
IFT52Q9Y366 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
IFT52Q9Y366 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
IFT52Q9Y366 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
IFT52Q9Y366 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
IFT52Q9Y366 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.38■□□□□ 0.69
IFT52Q9Y366 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.38■□□□□ 0.69
IFT52Q9Y366 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.38■□□□□ 0.69
IFT52Q9Y366 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.38■□□□□ 0.69
IFT52Q9Y366 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
IFT52Q9Y366 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
IFT52Q9Y366 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
IFT52Q9Y366 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IFT52Q9Y366 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
IFT52Q9Y366 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.37■□□□□ 0.69
IFT52Q9Y366 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
IFT52Q9Y366 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.37■□□□□ 0.69
IFT52Q9Y366 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
IFT52Q9Y366 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.37■□□□□ 0.69
IFT52Q9Y366 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.37■□□□□ 0.69
IFT52Q9Y366 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
IFT52Q9Y366 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
IFT52Q9Y366 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.37■□□□□ 0.69
IFT52Q9Y366 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IFT52Q9Y366 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
IFT52Q9Y366 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IFT52Q9Y366 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IFT52Q9Y366 LINC01006-201ENST00000333319 2292 ntBASIC19.36■□□□□ 0.69
IFT52Q9Y366 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
IFT52Q9Y366 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
IFT52Q9Y366 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
IFT52Q9Y366 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
IFT52Q9Y366 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.36■□□□□ 0.69
IFT52Q9Y366 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
IFT52Q9Y366 AC142381.2-201ENST00000566120 298 ntBASIC19.36■□□□□ 0.69
IFT52Q9Y366 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
IFT52Q9Y366 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.36■□□□□ 0.69
IFT52Q9Y366 AL358852.1-201ENST00000623174 1268 ntBASIC19.36■□□□□ 0.69
IFT52Q9Y366 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.36■□□□□ 0.69
IFT52Q9Y366 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IFT52Q9Y366 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IFT52Q9Y366 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.36■□□□□ 0.69
IFT52Q9Y366 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IFT52Q9Y366 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
IFT52Q9Y366 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.35■□□□□ 0.69
IFT52Q9Y366 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
IFT52Q9Y366 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.35■□□□□ 0.69
IFT52Q9Y366 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.35■□□□□ 0.69
IFT52Q9Y366 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
IFT52Q9Y366 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
IFT52Q9Y366 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
IFT52Q9Y366 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
IFT52Q9Y366 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
IFT52Q9Y366 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
IFT52Q9Y366 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
IFT52Q9Y366 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.35■□□□□ 0.69
IFT52Q9Y366 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
IFT52Q9Y366 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
IFT52Q9Y366 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.35■□□□□ 0.69
IFT52Q9Y366 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
IFT52Q9Y366 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
IFT52Q9Y366 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
IFT52Q9Y366 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
IFT52Q9Y366 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
IFT52Q9Y366 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms