Protein–RNA interactions for Protein: Q9UN72

PCDHA7, Protocadherin alpha-7, humanhuman

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA7Q9UN72 AL358852.1-201ENST00000623174 1268 ntBASIC23.64■■□□□ 1.37
PCDHA7Q9UN72 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHA7Q9UN72 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
PCDHA7Q9UN72 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHA7Q9UN72 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHA7Q9UN72 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
PCDHA7Q9UN72 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
PCDHA7Q9UN72 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC23.64■■□□□ 1.37
PCDHA7Q9UN72 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHA7Q9UN72 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHA7Q9UN72 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHA7Q9UN72 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHA7Q9UN72 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHA7Q9UN72 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC23.63■■□□□ 1.37
PCDHA7Q9UN72 AP004607.4-201ENST00000530158 1459 ntBASIC23.63■■□□□ 1.37
PCDHA7Q9UN72 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHA7Q9UN72 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC23.63■■□□□ 1.37
PCDHA7Q9UN72 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHA7Q9UN72 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHA7Q9UN72 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
PCDHA7Q9UN72 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHA7Q9UN72 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC23.62■■□□□ 1.37
PCDHA7Q9UN72 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.62■■□□□ 1.37
PCDHA7Q9UN72 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.62■■□□□ 1.37
PCDHA7Q9UN72 AC142381.2-201ENST00000566120 298 ntBASIC23.62■■□□□ 1.37
PCDHA7Q9UN72 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC23.62■■□□□ 1.37
PCDHA7Q9UN72 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHA7Q9UN72 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHA7Q9UN72 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC23.62■■□□□ 1.37
PCDHA7Q9UN72 BID-203ENST00000399765 1879 ntTSL 2 BASIC23.62■■□□□ 1.37
PCDHA7Q9UN72 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC23.62■■□□□ 1.37
PCDHA7Q9UN72 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
PCDHA7Q9UN72 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
PCDHA7Q9UN72 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC23.61■■□□□ 1.37
PCDHA7Q9UN72 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHA7Q9UN72 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHA7Q9UN72 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
PCDHA7Q9UN72 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHA7Q9UN72 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHA7Q9UN72 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.61■■□□□ 1.37
PCDHA7Q9UN72 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHA7Q9UN72 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHA7Q9UN72 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC23.61■■□□□ 1.37
PCDHA7Q9UN72 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHA7Q9UN72 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC23.61■■□□□ 1.37
PCDHA7Q9UN72 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHA7Q9UN72 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHA7Q9UN72 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHA7Q9UN72 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC23.61■■□□□ 1.37
PCDHA7Q9UN72 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHA7Q9UN72 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC23.6■■□□□ 1.37
PCDHA7Q9UN72 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
PCDHA7Q9UN72 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHA7Q9UN72 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHA7Q9UN72 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHA7Q9UN72 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC23.6■■□□□ 1.37
PCDHA7Q9UN72 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHA7Q9UN72 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC23.6■■□□□ 1.37
PCDHA7Q9UN72 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHA7Q9UN72 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHA7Q9UN72 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHA7Q9UN72 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.59■■□□□ 1.37
PCDHA7Q9UN72 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.59■■□□□ 1.37
PCDHA7Q9UN72 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC23.59■■□□□ 1.37
PCDHA7Q9UN72 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.59■■□□□ 1.37
PCDHA7Q9UN72 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHA7Q9UN72 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHA7Q9UN72 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHA7Q9UN72 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHA7Q9UN72 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHA7Q9UN72 AC011484.1-201ENST00000377652 1995 ntBASIC23.58■■□□□ 1.37
PCDHA7Q9UN72 FP700111.2-201ENST00000619190 1892 ntBASIC23.58■■□□□ 1.37
PCDHA7Q9UN72 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHA7Q9UN72 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHA7Q9UN72 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC23.58■■□□□ 1.37
PCDHA7Q9UN72 AC005837.3-201ENST00000612163 286 ntBASIC23.58■■□□□ 1.37
PCDHA7Q9UN72 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHA7Q9UN72 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
PCDHA7Q9UN72 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.36
PCDHA7Q9UN72 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.58■■□□□ 1.36
PCDHA7Q9UN72 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
PCDHA7Q9UN72 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
PCDHA7Q9UN72 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHA7Q9UN72 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHA7Q9UN72 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
PCDHA7Q9UN72 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHA7Q9UN72 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHA7Q9UN72 AC020907.5-201ENST00000624372 1936 ntBASIC23.57■■□□□ 1.36
PCDHA7Q9UN72 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHA7Q9UN72 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC23.57■■□□□ 1.36
PCDHA7Q9UN72 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHA7Q9UN72 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHA7Q9UN72 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHA7Q9UN72 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.57■■□□□ 1.36
PCDHA7Q9UN72 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.57■■□□□ 1.36
PCDHA7Q9UN72 AC079140.4-201ENST00000507448 529 ntBASIC23.57■■□□□ 1.36
PCDHA7Q9UN72 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.57■■□□□ 1.36
PCDHA7Q9UN72 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.57■■□□□ 1.36
PCDHA7Q9UN72 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.57■■□□□ 1.36
PCDHA7Q9UN72 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms