Protein–RNA interactions for Protein: Q9UHF7

TRPS1, Zinc finger transcription factor Trps1, humanhuman

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1Q9UHF7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
TRPS1Q9UHF7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRPS1Q9UHF7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.07■□□□□ 0.8
TRPS1Q9UHF7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRPS1Q9UHF7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.07■□□□□ 0.8
TRPS1Q9UHF7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRPS1Q9UHF7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRPS1Q9UHF7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRPS1Q9UHF7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRPS1Q9UHF7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRPS1Q9UHF7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRPS1Q9UHF7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRPS1Q9UHF7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.07■□□□□ 0.8
TRPS1Q9UHF7 AC138907.5-202ENST00000569484 235 ntBASIC20.07■□□□□ 0.8
TRPS1Q9UHF7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRPS1Q9UHF7 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRPS1Q9UHF7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRPS1Q9UHF7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.06■□□□□ 0.8
TRPS1Q9UHF7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
TRPS1Q9UHF7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRPS1Q9UHF7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRPS1Q9UHF7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.06■□□□□ 0.8
TRPS1Q9UHF7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.06■□□□□ 0.8
TRPS1Q9UHF7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRPS1Q9UHF7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRPS1Q9UHF7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TRPS1Q9UHF7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.06■□□□□ 0.8
TRPS1Q9UHF7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRPS1Q9UHF7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TRPS1Q9UHF7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
TRPS1Q9UHF7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TRPS1Q9UHF7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRPS1Q9UHF7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRPS1Q9UHF7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRPS1Q9UHF7 LINC01006-201ENST00000333319 2292 ntBASIC20.05■□□□□ 0.8
TRPS1Q9UHF7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRPS1Q9UHF7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRPS1Q9UHF7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRPS1Q9UHF7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRPS1Q9UHF7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRPS1Q9UHF7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.05■□□□□ 0.8
TRPS1Q9UHF7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.05■□□□□ 0.8
TRPS1Q9UHF7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TRPS1Q9UHF7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRPS1Q9UHF7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TRPS1Q9UHF7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
TRPS1Q9UHF7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TRPS1Q9UHF7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRPS1Q9UHF7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.05■□□□□ 0.8
TRPS1Q9UHF7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.05■□□□□ 0.8
TRPS1Q9UHF7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRPS1Q9UHF7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
TRPS1Q9UHF7 LINC02228-203ENST00000641970 1355 ntBASIC20.05■□□□□ 0.8
TRPS1Q9UHF7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRPS1Q9UHF7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRPS1Q9UHF7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRPS1Q9UHF7 GABARAPL3-202ENST00000624044 1851 ntBASIC20.05■□□□□ 0.8
TRPS1Q9UHF7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRPS1Q9UHF7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRPS1Q9UHF7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TRPS1Q9UHF7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.04■□□□□ 0.8
TRPS1Q9UHF7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRPS1Q9UHF7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TRPS1Q9UHF7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRPS1Q9UHF7 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.04■□□□□ 0.8
TRPS1Q9UHF7 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRPS1Q9UHF7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRPS1Q9UHF7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRPS1Q9UHF7 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.04■□□□□ 0.8
TRPS1Q9UHF7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRPS1Q9UHF7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.04■□□□□ 0.8
TRPS1Q9UHF7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.04■□□□□ 0.8
TRPS1Q9UHF7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRPS1Q9UHF7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.04■□□□□ 0.8
TRPS1Q9UHF7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRPS1Q9UHF7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRPS1Q9UHF7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRPS1Q9UHF7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRPS1Q9UHF7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRPS1Q9UHF7 AC011484.1-201ENST00000377652 1995 ntBASIC20.03■□□□□ 0.8
TRPS1Q9UHF7 AP005212.1-201ENST00000581547 1997 ntBASIC20.03■□□□□ 0.8
TRPS1Q9UHF7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.03■□□□□ 0.8
TRPS1Q9UHF7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRPS1Q9UHF7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.03■□□□□ 0.8
TRPS1Q9UHF7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.03■□□□□ 0.8
TRPS1Q9UHF7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.03■□□□□ 0.8
TRPS1Q9UHF7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRPS1Q9UHF7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRPS1Q9UHF7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRPS1Q9UHF7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRPS1Q9UHF7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
TRPS1Q9UHF7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRPS1Q9UHF7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRPS1Q9UHF7 KRT16P2-201ENST00000414673 1423 ntBASIC20.02■□□□□ 0.8
TRPS1Q9UHF7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.02■□□□□ 0.8
TRPS1Q9UHF7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.02■□□□□ 0.8
TRPS1Q9UHF7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
TRPS1Q9UHF7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRPS1Q9UHF7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.02■□□□□ 0.8
TRPS1Q9UHF7 AC010141.2-201ENST00000452426 721 ntBASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms