Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTSFQ9UBX1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CTSFQ9UBX1 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTSFQ9UBX1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTSFQ9UBX1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTSFQ9UBX1 AL512625.2-201ENST00000417533 625 ntBASIC19.58■□□□□ 0.72
CTSFQ9UBX1 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTSFQ9UBX1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.58■□□□□ 0.72
CTSFQ9UBX1 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.58■□□□□ 0.72
CTSFQ9UBX1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.58■□□□□ 0.72
CTSFQ9UBX1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CTSFQ9UBX1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.58■□□□□ 0.72
CTSFQ9UBX1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTSFQ9UBX1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.57■□□□□ 0.72
CTSFQ9UBX1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.57■□□□□ 0.72
CTSFQ9UBX1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTSFQ9UBX1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTSFQ9UBX1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.57■□□□□ 0.72
CTSFQ9UBX1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CTSFQ9UBX1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.57■□□□□ 0.72
CTSFQ9UBX1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTSFQ9UBX1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.57■□□□□ 0.72
CTSFQ9UBX1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
CTSFQ9UBX1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.57■□□□□ 0.72
CTSFQ9UBX1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CTSFQ9UBX1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.57■□□□□ 0.72
CTSFQ9UBX1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTSFQ9UBX1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CTSFQ9UBX1 FBXW4P1-201ENST00000426721 2239 ntBASIC19.56■□□□□ 0.72
CTSFQ9UBX1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTSFQ9UBX1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTSFQ9UBX1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.56■□□□□ 0.72
CTSFQ9UBX1 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTSFQ9UBX1 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTSFQ9UBX1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CTSFQ9UBX1 BX276092.2-201ENST00000417668 665 ntBASIC19.56■□□□□ 0.72
CTSFQ9UBX1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.56■□□□□ 0.72
CTSFQ9UBX1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.56■□□□□ 0.72
CTSFQ9UBX1 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.56■□□□□ 0.72
CTSFQ9UBX1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.56■□□□□ 0.72
CTSFQ9UBX1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.56■□□□□ 0.72
CTSFQ9UBX1 AC010980.2-201ENST00000587099 1412 ntBASIC19.56■□□□□ 0.72
CTSFQ9UBX1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTSFQ9UBX1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTSFQ9UBX1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTSFQ9UBX1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.56■□□□□ 0.72
CTSFQ9UBX1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTSFQ9UBX1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CTSFQ9UBX1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.56■□□□□ 0.72
CTSFQ9UBX1 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTSFQ9UBX1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CTSFQ9UBX1 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTSFQ9UBX1 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.56■□□□□ 0.72
CTSFQ9UBX1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
CTSFQ9UBX1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTSFQ9UBX1 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CTSFQ9UBX1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTSFQ9UBX1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CTSFQ9UBX1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTSFQ9UBX1 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
CTSFQ9UBX1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.55■□□□□ 0.72
CTSFQ9UBX1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.55■□□□□ 0.72
CTSFQ9UBX1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.55■□□□□ 0.72
CTSFQ9UBX1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.55■□□□□ 0.72
CTSFQ9UBX1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.55■□□□□ 0.72
CTSFQ9UBX1 MIR4758-201ENST00000577688 71 ntBASIC19.55■□□□□ 0.72
CTSFQ9UBX1 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CTSFQ9UBX1 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
CTSFQ9UBX1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.55■□□□□ 0.72
CTSFQ9UBX1 AC133041.1-202ENST00000642053 222 ntBASIC19.55■□□□□ 0.72
CTSFQ9UBX1 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTSFQ9UBX1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.55■□□□□ 0.72
CTSFQ9UBX1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CTSFQ9UBX1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTSFQ9UBX1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.54■□□□□ 0.72
CTSFQ9UBX1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CTSFQ9UBX1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTSFQ9UBX1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTSFQ9UBX1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTSFQ9UBX1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTSFQ9UBX1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CTSFQ9UBX1 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CTSFQ9UBX1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.54■□□□□ 0.72
CTSFQ9UBX1 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CTSFQ9UBX1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.54■□□□□ 0.72
CTSFQ9UBX1 CDV3P1-201ENST00000471403 739 ntBASIC19.54■□□□□ 0.72
CTSFQ9UBX1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CTSFQ9UBX1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTSFQ9UBX1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTSFQ9UBX1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CTSFQ9UBX1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CTSFQ9UBX1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.54■□□□□ 0.72
CTSFQ9UBX1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CTSFQ9UBX1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CTSFQ9UBX1 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CTSFQ9UBX1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.54■□□□□ 0.72
CTSFQ9UBX1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTSFQ9UBX1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.53■□□□□ 0.72
CTSFQ9UBX1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.53■□□□□ 0.72
CTSFQ9UBX1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms